Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33613 | 101062;101063;101064 | chr2:178535778;178535777;178535776 | chr2:179400505;179400504;179400503 |
N2AB | 31972 | 96139;96140;96141 | chr2:178535778;178535777;178535776 | chr2:179400505;179400504;179400503 |
N2A | 31045 | 93358;93359;93360 | chr2:178535778;178535777;178535776 | chr2:179400505;179400504;179400503 |
N2B | 24548 | 73867;73868;73869 | chr2:178535778;178535777;178535776 | chr2:179400505;179400504;179400503 |
Novex-1 | 24673 | 74242;74243;74244 | chr2:178535778;178535777;178535776 | chr2:179400505;179400504;179400503 |
Novex-2 | 24740 | 74443;74444;74445 | chr2:178535778;178535777;178535776 | chr2:179400505;179400504;179400503 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 0.942 | N | 0.829 | 0.473 | 0.685509544888 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/I | rs1691163067 | None | None | N | 0.199 | 0.143 | 0.154104182512 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/I | rs1691163067 | None | None | N | 0.199 | 0.143 | 0.154104182512 | gnomAD-4.0.0 | 2.56487E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78696E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7098 | likely_pathogenic | 0.4934 | ambiguous | -1.456 | Destabilizing | 0.219 | N | 0.557 | neutral | N | 0.46207844 | None | None | N |
V/C | 0.9087 | likely_pathogenic | 0.8284 | pathogenic | -1.206 | Destabilizing | 0.987 | D | 0.73 | prob.delet. | None | None | None | None | N |
V/D | 0.9816 | likely_pathogenic | 0.9489 | pathogenic | -1.219 | Destabilizing | 0.922 | D | 0.833 | deleterious | N | 0.486009411 | None | None | N |
V/E | 0.9464 | likely_pathogenic | 0.8828 | pathogenic | -1.072 | Destabilizing | 0.719 | D | 0.813 | deleterious | None | None | None | None | N |
V/F | 0.6875 | likely_pathogenic | 0.3907 | ambiguous | -0.768 | Destabilizing | 0.816 | D | 0.818 | deleterious | N | 0.461775863 | None | None | N |
V/G | 0.8953 | likely_pathogenic | 0.7756 | pathogenic | -1.916 | Destabilizing | 0.942 | D | 0.829 | deleterious | N | 0.462789821 | None | None | N |
V/H | 0.9714 | likely_pathogenic | 0.9196 | pathogenic | -1.392 | Destabilizing | 0.99 | D | 0.799 | deleterious | None | None | None | None | N |
V/I | 0.087 | likely_benign | 0.0752 | benign | -0.236 | Destabilizing | None | N | 0.199 | neutral | N | 0.456192618 | None | None | N |
V/K | 0.9258 | likely_pathogenic | 0.8379 | pathogenic | -1.237 | Destabilizing | 0.848 | D | 0.816 | deleterious | None | None | None | None | N |
V/L | 0.3589 | ambiguous | 0.2054 | benign | -0.236 | Destabilizing | 0.003 | N | 0.393 | neutral | N | 0.437297426 | None | None | N |
V/M | 0.495 | ambiguous | 0.2707 | benign | -0.385 | Destabilizing | 0.808 | D | 0.669 | neutral | None | None | None | None | N |
V/N | 0.9354 | likely_pathogenic | 0.8335 | pathogenic | -1.396 | Destabilizing | 0.716 | D | 0.831 | deleterious | None | None | None | None | N |
V/P | 0.984 | likely_pathogenic | 0.9587 | pathogenic | -0.61 | Destabilizing | 0.716 | D | 0.789 | deleterious | None | None | None | None | N |
V/Q | 0.918 | likely_pathogenic | 0.8197 | pathogenic | -1.301 | Destabilizing | 0.923 | D | 0.797 | deleterious | None | None | None | None | N |
V/R | 0.8977 | likely_pathogenic | 0.8015 | pathogenic | -1.013 | Destabilizing | 0.922 | D | 0.831 | deleterious | None | None | None | None | N |
V/S | 0.8921 | likely_pathogenic | 0.7493 | pathogenic | -2.063 | Highly Destabilizing | 0.865 | D | 0.803 | deleterious | None | None | None | None | N |
V/T | 0.6787 | likely_pathogenic | 0.4999 | ambiguous | -1.763 | Destabilizing | 0.267 | N | 0.631 | neutral | None | None | None | None | N |
V/W | 0.9901 | likely_pathogenic | 0.9651 | pathogenic | -1.091 | Destabilizing | 0.997 | D | 0.768 | deleterious | None | None | None | None | N |
V/Y | 0.9588 | likely_pathogenic | 0.8686 | pathogenic | -0.709 | Destabilizing | 0.922 | D | 0.791 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.