Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33615 | 101068;101069;101070 | chr2:178535772;178535771;178535770 | chr2:179400499;179400498;179400497 |
N2AB | 31974 | 96145;96146;96147 | chr2:178535772;178535771;178535770 | chr2:179400499;179400498;179400497 |
N2A | 31047 | 93364;93365;93366 | chr2:178535772;178535771;178535770 | chr2:179400499;179400498;179400497 |
N2B | 24550 | 73873;73874;73875 | chr2:178535772;178535771;178535770 | chr2:179400499;179400498;179400497 |
Novex-1 | 24675 | 74248;74249;74250 | chr2:178535772;178535771;178535770 | chr2:179400499;179400498;179400497 |
Novex-2 | 24742 | 74449;74450;74451 | chr2:178535772;178535771;178535770 | chr2:179400499;179400498;179400497 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.987 | N | 0.368 | 0.342 | 0.602107291794 | gnomAD-4.0.0 | 1.5923E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85853E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9873 | likely_pathogenic | 0.9697 | pathogenic | -2.146 | Highly Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
I/C | 0.9879 | likely_pathogenic | 0.9751 | pathogenic | -1.712 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
I/D | 0.9997 | likely_pathogenic | 0.9991 | pathogenic | -2.065 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
I/E | 0.9984 | likely_pathogenic | 0.9961 | pathogenic | -1.818 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
I/F | 0.6902 | likely_pathogenic | 0.4811 | ambiguous | -1.309 | Destabilizing | 1.0 | D | 0.809 | deleterious | N | 0.467380765 | None | None | N |
I/G | 0.9988 | likely_pathogenic | 0.9965 | pathogenic | -2.64 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
I/H | 0.9975 | likely_pathogenic | 0.994 | pathogenic | -1.971 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
I/K | 0.9965 | likely_pathogenic | 0.9922 | pathogenic | -1.704 | Destabilizing | 0.999 | D | 0.876 | deleterious | None | None | None | None | N |
I/L | 0.3044 | likely_benign | 0.22 | benign | -0.71 | Destabilizing | 0.983 | D | 0.397 | neutral | N | 0.417952022 | None | None | N |
I/M | 0.403 | ambiguous | 0.2733 | benign | -0.857 | Destabilizing | 1.0 | D | 0.754 | deleterious | N | 0.502120562 | None | None | N |
I/N | 0.9956 | likely_pathogenic | 0.9903 | pathogenic | -2.172 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | N | 0.508876374 | None | None | N |
I/P | 0.9992 | likely_pathogenic | 0.998 | pathogenic | -1.173 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
I/Q | 0.9959 | likely_pathogenic | 0.9909 | pathogenic | -1.902 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
I/R | 0.9943 | likely_pathogenic | 0.9877 | pathogenic | -1.687 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
I/S | 0.994 | likely_pathogenic | 0.9865 | pathogenic | -2.843 | Highly Destabilizing | 1.0 | D | 0.862 | deleterious | N | 0.508876374 | None | None | N |
I/T | 0.9893 | likely_pathogenic | 0.9763 | pathogenic | -2.432 | Highly Destabilizing | 1.0 | D | 0.814 | deleterious | N | 0.497101995 | None | None | N |
I/V | 0.1893 | likely_benign | 0.1568 | benign | -1.173 | Destabilizing | 0.987 | D | 0.368 | neutral | N | 0.500504409 | None | None | N |
I/W | 0.9932 | likely_pathogenic | 0.9827 | pathogenic | -1.486 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
I/Y | 0.9813 | likely_pathogenic | 0.9583 | pathogenic | -1.255 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.