Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33628 | 101107;101108;101109 | chr2:178535733;178535732;178535731 | chr2:179400460;179400459;179400458 |
N2AB | 31987 | 96184;96185;96186 | chr2:178535733;178535732;178535731 | chr2:179400460;179400459;179400458 |
N2A | 31060 | 93403;93404;93405 | chr2:178535733;178535732;178535731 | chr2:179400460;179400459;179400458 |
N2B | 24563 | 73912;73913;73914 | chr2:178535733;178535732;178535731 | chr2:179400460;179400459;179400458 |
Novex-1 | 24688 | 74287;74288;74289 | chr2:178535733;178535732;178535731 | chr2:179400460;179400459;179400458 |
Novex-2 | 24755 | 74488;74489;74490 | chr2:178535733;178535732;178535731 | chr2:179400460;179400459;179400458 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs200085900 | None | 1.0 | N | 0.761 | 0.567 | 0.7073580974 | gnomAD-4.0.0 | 3.18286E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.4108E-04 | 2.85847E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.6279 | likely_pathogenic | 0.3664 | ambiguous | -0.707 | Destabilizing | 0.998 | D | 0.563 | neutral | N | 0.4976582 | None | None | N |
T/C | 0.9233 | likely_pathogenic | 0.8069 | pathogenic | -0.482 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
T/D | 0.9764 | likely_pathogenic | 0.9194 | pathogenic | -0.264 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
T/E | 0.9488 | likely_pathogenic | 0.8327 | pathogenic | -0.213 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
T/F | 0.9057 | likely_pathogenic | 0.7312 | pathogenic | -0.574 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
T/G | 0.8897 | likely_pathogenic | 0.7961 | pathogenic | -1.02 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | N |
T/H | 0.8772 | likely_pathogenic | 0.6811 | pathogenic | -1.222 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
T/I | 0.7918 | likely_pathogenic | 0.5172 | ambiguous | 0.048 | Stabilizing | 1.0 | D | 0.761 | deleterious | N | 0.499686116 | None | None | N |
T/K | 0.9294 | likely_pathogenic | 0.7632 | pathogenic | -0.737 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
T/L | 0.6356 | likely_pathogenic | 0.3583 | ambiguous | 0.048 | Stabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | N |
T/M | 0.5536 | ambiguous | 0.2809 | benign | 0.101 | Stabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
T/N | 0.7569 | likely_pathogenic | 0.4992 | ambiguous | -0.801 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | N | 0.513813898 | None | None | N |
T/P | 0.97 | likely_pathogenic | 0.9359 | pathogenic | -0.17 | Destabilizing | 1.0 | D | 0.762 | deleterious | D | 0.525930672 | None | None | N |
T/Q | 0.8239 | likely_pathogenic | 0.613 | pathogenic | -0.815 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
T/R | 0.8951 | likely_pathogenic | 0.6949 | pathogenic | -0.612 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
T/S | 0.5757 | likely_pathogenic | 0.3356 | benign | -1.057 | Destabilizing | 0.998 | D | 0.539 | neutral | N | 0.501963059 | None | None | N |
T/V | 0.6503 | likely_pathogenic | 0.4173 | ambiguous | -0.17 | Destabilizing | 1.0 | D | 0.579 | neutral | None | None | None | None | N |
T/W | 0.9794 | likely_pathogenic | 0.9408 | pathogenic | -0.595 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
T/Y | 0.923 | likely_pathogenic | 0.7711 | pathogenic | -0.335 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.