Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33634 | 101125;101126;101127 | chr2:178535715;178535714;178535713 | chr2:179400442;179400441;179400440 |
N2AB | 31993 | 96202;96203;96204 | chr2:178535715;178535714;178535713 | chr2:179400442;179400441;179400440 |
N2A | 31066 | 93421;93422;93423 | chr2:178535715;178535714;178535713 | chr2:179400442;179400441;179400440 |
N2B | 24569 | 73930;73931;73932 | chr2:178535715;178535714;178535713 | chr2:179400442;179400441;179400440 |
Novex-1 | 24694 | 74305;74306;74307 | chr2:178535715;178535714;178535713 | chr2:179400442;179400441;179400440 |
Novex-2 | 24761 | 74506;74507;74508 | chr2:178535715;178535714;178535713 | chr2:179400442;179400441;179400440 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | rs763684680 | 0.288 | 0.996 | N | 0.733 | 0.563 | 0.638930745872 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
D/V | rs763684680 | 0.288 | 0.996 | N | 0.733 | 0.563 | 0.638930745872 | gnomAD-4.0.0 | 1.59133E-06 | None | None | None | None | N | None | 0 | 2.28634E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.5334 | ambiguous | 0.3715 | ambiguous | -0.228 | Destabilizing | 0.981 | D | 0.609 | neutral | N | 0.44336026 | None | None | N |
D/C | 0.9495 | likely_pathogenic | 0.8777 | pathogenic | -0.09 | Destabilizing | 0.999 | D | 0.7 | prob.neutral | None | None | None | None | N |
D/E | 0.304 | likely_benign | 0.214 | benign | -0.244 | Destabilizing | 0.072 | N | 0.297 | neutral | N | 0.416384302 | None | None | N |
D/F | 0.8867 | likely_pathogenic | 0.7973 | pathogenic | -0.134 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
D/G | 0.6012 | likely_pathogenic | 0.4577 | ambiguous | -0.413 | Destabilizing | 0.987 | D | 0.623 | neutral | N | 0.448075433 | None | None | N |
D/H | 0.7491 | likely_pathogenic | 0.5911 | pathogenic | 0.153 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | N | 0.481745289 | None | None | N |
D/I | 0.7541 | likely_pathogenic | 0.5641 | pathogenic | 0.207 | Stabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
D/K | 0.8483 | likely_pathogenic | 0.6793 | pathogenic | 0.3 | Stabilizing | 0.999 | D | 0.65 | neutral | None | None | None | None | N |
D/L | 0.7672 | likely_pathogenic | 0.6141 | pathogenic | 0.207 | Stabilizing | 0.999 | D | 0.732 | prob.delet. | None | None | None | None | N |
D/M | 0.8919 | likely_pathogenic | 0.7822 | pathogenic | 0.206 | Stabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
D/N | 0.2987 | likely_benign | 0.1986 | benign | -0.015 | Destabilizing | 0.994 | D | 0.577 | neutral | N | 0.473683167 | None | None | N |
D/P | 0.9882 | likely_pathogenic | 0.9715 | pathogenic | 0.083 | Stabilizing | 0.991 | D | 0.693 | prob.neutral | None | None | None | None | N |
D/Q | 0.7177 | likely_pathogenic | 0.5496 | ambiguous | 0.021 | Stabilizing | 0.997 | D | 0.652 | neutral | None | None | None | None | N |
D/R | 0.8724 | likely_pathogenic | 0.7473 | pathogenic | 0.519 | Stabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | N |
D/S | 0.4365 | ambiguous | 0.2941 | benign | -0.125 | Destabilizing | 0.986 | D | 0.556 | neutral | None | None | None | None | N |
D/T | 0.6031 | likely_pathogenic | 0.4237 | ambiguous | 0.022 | Stabilizing | 0.995 | D | 0.671 | neutral | None | None | None | None | N |
D/V | 0.5333 | ambiguous | 0.3644 | ambiguous | 0.083 | Stabilizing | 0.996 | D | 0.733 | prob.delet. | N | 0.443322974 | None | None | N |
D/W | 0.9845 | likely_pathogenic | 0.9667 | pathogenic | -0.006 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
D/Y | 0.591 | likely_pathogenic | 0.4361 | ambiguous | 0.101 | Stabilizing | 1.0 | D | 0.719 | prob.delet. | D | 0.530576599 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.