Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33660 | 101203;101204;101205 | chr2:178535637;178535636;178535635 | chr2:179400364;179400363;179400362 |
N2AB | 32019 | 96280;96281;96282 | chr2:178535637;178535636;178535635 | chr2:179400364;179400363;179400362 |
N2A | 31092 | 93499;93500;93501 | chr2:178535637;178535636;178535635 | chr2:179400364;179400363;179400362 |
N2B | 24595 | 74008;74009;74010 | chr2:178535637;178535636;178535635 | chr2:179400364;179400363;179400362 |
Novex-1 | 24720 | 74383;74384;74385 | chr2:178535637;178535636;178535635 | chr2:179400364;179400363;179400362 |
Novex-2 | 24787 | 74584;74585;74586 | chr2:178535637;178535636;178535635 | chr2:179400364;179400363;179400362 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs727503536 | None | 0.002 | N | 0.233 | 0.064 | 0.260249123532 | gnomAD-4.0.0 | 2.05268E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79895E-06 | 0 | 1.65651E-05 |
E/G | rs1309484886 | -1.067 | 0.932 | N | 0.436 | 0.49 | 0.56713362702 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
E/G | rs1309484886 | -1.067 | 0.932 | N | 0.436 | 0.49 | 0.56713362702 | gnomAD-4.0.0 | 6.84207E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99467E-07 | 0 | 0 |
E/K | rs1355308623 | -0.304 | 0.791 | N | 0.423 | 0.288 | 0.400613892164 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs1355308623 | -0.304 | 0.791 | N | 0.423 | 0.288 | 0.400613892164 | gnomAD-4.0.0 | 1.59129E-06 | None | None | None | None | N | None | 0 | 2.28634E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | None | None | 0.174 | N | 0.233 | 0.161 | 0.266385636622 | gnomAD-4.0.0 | 1.59129E-06 | None | None | None | None | N | None | 0 | 2.28634E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/V | rs1309484886 | 0.285 | 0.947 | N | 0.497 | 0.557 | 0.681466305809 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
E/V | rs1309484886 | 0.285 | 0.947 | N | 0.497 | 0.557 | 0.681466305809 | gnomAD-4.0.0 | 4.78945E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29627E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3259 | likely_benign | 0.2337 | benign | -0.615 | Destabilizing | 0.804 | D | 0.398 | neutral | N | 0.492655716 | None | None | N |
E/C | 0.9443 | likely_pathogenic | 0.8875 | pathogenic | -0.359 | Destabilizing | 0.998 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/D | 0.1239 | likely_benign | 0.1236 | benign | -0.903 | Destabilizing | 0.002 | N | 0.233 | neutral | N | 0.483132156 | None | None | N |
E/F | 0.9242 | likely_pathogenic | 0.8432 | pathogenic | -0.066 | Destabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | N |
E/G | 0.3066 | likely_benign | 0.1986 | benign | -0.95 | Destabilizing | 0.932 | D | 0.436 | neutral | N | 0.50941468 | None | None | N |
E/H | 0.7583 | likely_pathogenic | 0.5969 | pathogenic | -0.212 | Destabilizing | 0.981 | D | 0.396 | neutral | None | None | None | None | N |
E/I | 0.764 | likely_pathogenic | 0.626 | pathogenic | 0.283 | Stabilizing | 0.971 | D | 0.654 | neutral | None | None | None | None | N |
E/K | 0.4966 | ambiguous | 0.2955 | benign | -0.386 | Destabilizing | 0.791 | D | 0.423 | neutral | N | 0.46746927 | None | None | N |
E/L | 0.6413 | likely_pathogenic | 0.4689 | ambiguous | 0.283 | Stabilizing | 0.943 | D | 0.553 | neutral | None | None | None | None | N |
E/M | 0.7472 | likely_pathogenic | 0.614 | pathogenic | 0.542 | Stabilizing | 0.986 | D | 0.591 | neutral | None | None | None | None | N |
E/N | 0.3476 | ambiguous | 0.268 | benign | -0.848 | Destabilizing | 0.793 | D | 0.392 | neutral | None | None | None | None | N |
E/P | 0.9486 | likely_pathogenic | 0.8902 | pathogenic | 0.005 | Stabilizing | 0.833 | D | 0.463 | neutral | None | None | None | None | N |
E/Q | 0.28 | likely_benign | 0.1867 | benign | -0.715 | Destabilizing | 0.174 | N | 0.233 | neutral | N | 0.432529977 | None | None | N |
E/R | 0.6324 | likely_pathogenic | 0.4314 | ambiguous | -0.068 | Destabilizing | 0.972 | D | 0.405 | neutral | None | None | None | None | N |
E/S | 0.3013 | likely_benign | 0.2198 | benign | -1.09 | Destabilizing | 0.844 | D | 0.377 | neutral | None | None | None | None | N |
E/T | 0.4203 | ambiguous | 0.3125 | benign | -0.815 | Destabilizing | 0.963 | D | 0.395 | neutral | None | None | None | None | N |
E/V | 0.5129 | ambiguous | 0.384 | ambiguous | 0.005 | Stabilizing | 0.947 | D | 0.497 | neutral | N | 0.504912938 | None | None | N |
E/W | 0.9797 | likely_pathogenic | 0.9487 | pathogenic | 0.169 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/Y | 0.8832 | likely_pathogenic | 0.765 | pathogenic | 0.176 | Stabilizing | 0.998 | D | 0.593 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.