Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33669 | 101230;101231;101232 | chr2:178535610;178535609;178535608 | chr2:179400337;179400336;179400335 |
N2AB | 32028 | 96307;96308;96309 | chr2:178535610;178535609;178535608 | chr2:179400337;179400336;179400335 |
N2A | 31101 | 93526;93527;93528 | chr2:178535610;178535609;178535608 | chr2:179400337;179400336;179400335 |
N2B | 24604 | 74035;74036;74037 | chr2:178535610;178535609;178535608 | chr2:179400337;179400336;179400335 |
Novex-1 | 24729 | 74410;74411;74412 | chr2:178535610;178535609;178535608 | chr2:179400337;179400336;179400335 |
Novex-2 | 24796 | 74611;74612;74613 | chr2:178535610;178535609;178535608 | chr2:179400337;179400336;179400335 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1331642312 | None | 0.662 | N | 0.338 | 0.126 | 0.452640719197 | gnomAD-4.0.0 | 3.42106E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49732E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.904 | likely_pathogenic | 0.8444 | pathogenic | -2.0 | Highly Destabilizing | 0.999 | D | 0.697 | prob.neutral | N | 0.483280432 | None | None | N |
V/C | 0.9693 | likely_pathogenic | 0.9626 | pathogenic | -1.65 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
V/D | 0.9994 | likely_pathogenic | 0.9988 | pathogenic | -2.502 | Highly Destabilizing | 1.0 | D | 0.833 | deleterious | N | 0.45732841 | None | None | N |
V/E | 0.9978 | likely_pathogenic | 0.9959 | pathogenic | -2.317 | Highly Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
V/F | 0.9443 | likely_pathogenic | 0.8688 | pathogenic | -1.197 | Destabilizing | 1.0 | D | 0.744 | deleterious | N | 0.455807473 | None | None | N |
V/G | 0.9679 | likely_pathogenic | 0.9452 | pathogenic | -2.522 | Highly Destabilizing | 1.0 | D | 0.83 | deleterious | N | 0.45707492 | None | None | N |
V/H | 0.9994 | likely_pathogenic | 0.9988 | pathogenic | -2.279 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
V/I | 0.1322 | likely_benign | 0.1083 | benign | -0.561 | Destabilizing | 0.662 | D | 0.338 | neutral | N | 0.427925794 | None | None | N |
V/K | 0.9986 | likely_pathogenic | 0.9974 | pathogenic | -1.697 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
V/L | 0.653 | likely_pathogenic | 0.5196 | ambiguous | -0.561 | Destabilizing | 0.151 | N | 0.403 | neutral | N | 0.428387154 | None | None | N |
V/M | 0.8639 | likely_pathogenic | 0.7418 | pathogenic | -0.625 | Destabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | N |
V/N | 0.9976 | likely_pathogenic | 0.9951 | pathogenic | -1.896 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
V/P | 0.9958 | likely_pathogenic | 0.993 | pathogenic | -1.011 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
V/Q | 0.9976 | likely_pathogenic | 0.9954 | pathogenic | -1.795 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
V/R | 0.9967 | likely_pathogenic | 0.9944 | pathogenic | -1.481 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
V/S | 0.9874 | likely_pathogenic | 0.9764 | pathogenic | -2.524 | Highly Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
V/T | 0.953 | likely_pathogenic | 0.9238 | pathogenic | -2.195 | Highly Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
V/W | 0.9996 | likely_pathogenic | 0.999 | pathogenic | -1.686 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
V/Y | 0.9974 | likely_pathogenic | 0.9942 | pathogenic | -1.315 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.