Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33677 | 101254;101255;101256 | chr2:178535586;178535585;178535584 | chr2:179400313;179400312;179400311 |
N2AB | 32036 | 96331;96332;96333 | chr2:178535586;178535585;178535584 | chr2:179400313;179400312;179400311 |
N2A | 31109 | 93550;93551;93552 | chr2:178535586;178535585;178535584 | chr2:179400313;179400312;179400311 |
N2B | 24612 | 74059;74060;74061 | chr2:178535586;178535585;178535584 | chr2:179400313;179400312;179400311 |
Novex-1 | 24737 | 74434;74435;74436 | chr2:178535586;178535585;178535584 | chr2:179400313;179400312;179400311 |
Novex-2 | 24804 | 74635;74636;74637 | chr2:178535586;178535585;178535584 | chr2:179400313;179400312;179400311 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1475771537 | -0.1 | 0.949 | N | 0.475 | 0.207 | 0.608471955132 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
I/T | rs1475771537 | -0.1 | 0.949 | N | 0.475 | 0.207 | 0.608471955132 | gnomAD-4.0.0 | 3.18237E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71615E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7003 | likely_pathogenic | 0.5042 | ambiguous | -0.611 | Destabilizing | 0.971 | D | 0.447 | neutral | None | None | None | None | I |
I/C | 0.9252 | likely_pathogenic | 0.8511 | pathogenic | -0.369 | Destabilizing | 1.0 | D | 0.551 | neutral | None | None | None | None | I |
I/D | 0.9662 | likely_pathogenic | 0.9087 | pathogenic | -0.362 | Destabilizing | 0.998 | D | 0.647 | neutral | None | None | None | None | I |
I/E | 0.8996 | likely_pathogenic | 0.7723 | pathogenic | -0.479 | Destabilizing | 0.998 | D | 0.615 | neutral | None | None | None | None | I |
I/F | 0.5002 | ambiguous | 0.3409 | ambiguous | -0.816 | Destabilizing | 0.994 | D | 0.445 | neutral | N | 0.47493396 | None | None | I |
I/G | 0.9433 | likely_pathogenic | 0.869 | pathogenic | -0.76 | Destabilizing | 0.994 | D | 0.597 | neutral | None | None | None | None | I |
I/H | 0.9285 | likely_pathogenic | 0.8254 | pathogenic | -0.213 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | I |
I/K | 0.8718 | likely_pathogenic | 0.7251 | pathogenic | -0.257 | Destabilizing | 0.944 | D | 0.599 | neutral | None | None | None | None | I |
I/L | 0.291 | likely_benign | 0.2183 | benign | -0.348 | Destabilizing | 0.246 | N | 0.187 | neutral | N | 0.469469426 | None | None | I |
I/M | 0.1922 | likely_benign | 0.1362 | benign | -0.234 | Destabilizing | 0.57 | D | 0.219 | neutral | N | 0.4563482 | None | None | I |
I/N | 0.7527 | likely_pathogenic | 0.5441 | ambiguous | 0.071 | Stabilizing | 0.998 | D | 0.658 | neutral | N | 0.455212049 | None | None | I |
I/P | 0.9776 | likely_pathogenic | 0.9575 | pathogenic | -0.402 | Destabilizing | 0.999 | D | 0.664 | neutral | None | None | None | None | I |
I/Q | 0.8597 | likely_pathogenic | 0.7066 | pathogenic | -0.218 | Destabilizing | 0.998 | D | 0.663 | neutral | None | None | None | None | I |
I/R | 0.8253 | likely_pathogenic | 0.656 | pathogenic | 0.31 | Stabilizing | 0.998 | D | 0.665 | neutral | None | None | None | None | I |
I/S | 0.6748 | likely_pathogenic | 0.4567 | ambiguous | -0.319 | Destabilizing | 0.828 | D | 0.398 | neutral | N | 0.381194293 | None | None | I |
I/T | 0.4661 | ambiguous | 0.2762 | benign | -0.333 | Destabilizing | 0.949 | D | 0.475 | neutral | N | 0.424254424 | None | None | I |
I/V | 0.1462 | likely_benign | 0.1116 | benign | -0.402 | Destabilizing | 0.301 | N | 0.269 | neutral | N | 0.461754019 | None | None | I |
I/W | 0.9445 | likely_pathogenic | 0.9047 | pathogenic | -0.842 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
I/Y | 0.8797 | likely_pathogenic | 0.7807 | pathogenic | -0.563 | Destabilizing | 0.994 | D | 0.539 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.