Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3368 | 10327;10328;10329 | chr2:178764189;178764188;178764187 | chr2:179628916;179628915;179628914 |
N2AB | 3368 | 10327;10328;10329 | chr2:178764189;178764188;178764187 | chr2:179628916;179628915;179628914 |
N2A | 3368 | 10327;10328;10329 | chr2:178764189;178764188;178764187 | chr2:179628916;179628915;179628914 |
N2B | 3322 | 10189;10190;10191 | chr2:178764189;178764188;178764187 | chr2:179628916;179628915;179628914 |
Novex-1 | 3322 | 10189;10190;10191 | chr2:178764189;178764188;178764187 | chr2:179628916;179628915;179628914 |
Novex-2 | 3322 | 10189;10190;10191 | chr2:178764189;178764188;178764187 | chr2:179628916;179628915;179628914 |
Novex-3 | 3368 | 10327;10328;10329 | chr2:178764189;178764188;178764187 | chr2:179628916;179628915;179628914 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs149309988 | -2.4 | 0.999 | D | 0.614 | 0.644 | None | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 6.15E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/A | rs149309988 | -2.4 | 0.999 | D | 0.614 | 0.644 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/A | rs149309988 | -2.4 | 0.999 | D | 0.614 | 0.644 | None | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 8E-04 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
V/A | rs149309988 | -2.4 | 0.999 | D | 0.614 | 0.644 | None | gnomAD-4.0.0 | 2.02961E-06 | None | None | None | None | N | None | 3.48736E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/F | None | None | 1.0 | D | 0.851 | 0.594 | 0.884733524946 | gnomAD-4.0.0 | 6.84086E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99326E-07 | 0 | 0 |
V/I | rs771921268 | -0.363 | 0.997 | N | 0.556 | 0.296 | 0.552980905328 | gnomAD-2.1.1 | 7.96E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.53E-05 | None | 0 | 0 | 0 |
V/I | rs771921268 | -0.363 | 0.997 | N | 0.556 | 0.296 | 0.552980905328 | gnomAD-4.0.0 | 4.10452E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79865E-06 | 4.63725E-05 | 0 |
V/L | rs771921268 | -0.366 | 0.997 | D | 0.629 | 0.437 | 0.574945690627 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/L | rs771921268 | -0.366 | 0.997 | D | 0.629 | 0.437 | 0.574945690627 | gnomAD-4.0.0 | 1.2392E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69495E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7317 | likely_pathogenic | 0.7317 | pathogenic | -1.892 | Destabilizing | 0.999 | D | 0.614 | neutral | D | 0.524968634 | None | None | N |
V/C | 0.9755 | likely_pathogenic | 0.971 | pathogenic | -1.453 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
V/D | 0.9951 | likely_pathogenic | 0.9937 | pathogenic | -2.478 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | D | 0.733439603 | None | None | N |
V/E | 0.9857 | likely_pathogenic | 0.982 | pathogenic | -2.19 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
V/F | 0.7462 | likely_pathogenic | 0.7379 | pathogenic | -1.025 | Destabilizing | 1.0 | D | 0.851 | deleterious | D | 0.645610175 | None | None | N |
V/G | 0.8751 | likely_pathogenic | 0.8704 | pathogenic | -2.497 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | D | 0.674133846 | None | None | N |
V/H | 0.9963 | likely_pathogenic | 0.9949 | pathogenic | -2.389 | Highly Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
V/I | 0.1127 | likely_benign | 0.112 | benign | -0.169 | Destabilizing | 0.997 | D | 0.556 | neutral | N | 0.503133155 | None | None | N |
V/K | 0.9918 | likely_pathogenic | 0.9896 | pathogenic | -1.364 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
V/L | 0.5384 | ambiguous | 0.5803 | pathogenic | -0.169 | Destabilizing | 0.997 | D | 0.629 | neutral | D | 0.53598611 | None | None | N |
V/M | 0.6338 | likely_pathogenic | 0.6245 | pathogenic | -0.433 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
V/N | 0.9881 | likely_pathogenic | 0.984 | pathogenic | -1.883 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
V/P | 0.9919 | likely_pathogenic | 0.9914 | pathogenic | -0.718 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
V/Q | 0.9878 | likely_pathogenic | 0.9843 | pathogenic | -1.578 | Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
V/R | 0.9859 | likely_pathogenic | 0.9818 | pathogenic | -1.485 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
V/S | 0.9395 | likely_pathogenic | 0.9299 | pathogenic | -2.516 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
V/T | 0.8637 | likely_pathogenic | 0.848 | pathogenic | -2.061 | Highly Destabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | N |
V/W | 0.9966 | likely_pathogenic | 0.9952 | pathogenic | -1.58 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
V/Y | 0.9822 | likely_pathogenic | 0.976 | pathogenic | -1.157 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.