Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33682 | 101269;101270;101271 | chr2:178535571;178535570;178535569 | chr2:179400298;179400297;179400296 |
N2AB | 32041 | 96346;96347;96348 | chr2:178535571;178535570;178535569 | chr2:179400298;179400297;179400296 |
N2A | 31114 | 93565;93566;93567 | chr2:178535571;178535570;178535569 | chr2:179400298;179400297;179400296 |
N2B | 24617 | 74074;74075;74076 | chr2:178535571;178535570;178535569 | chr2:179400298;179400297;179400296 |
Novex-1 | 24742 | 74449;74450;74451 | chr2:178535571;178535570;178535569 | chr2:179400298;179400297;179400296 |
Novex-2 | 24809 | 74650;74651;74652 | chr2:178535571;178535570;178535569 | chr2:179400298;179400297;179400296 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs768803095 | -2.342 | 0.999 | N | 0.501 | 0.465 | 0.581818759506 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
V/A | rs768803095 | -2.342 | 0.999 | N | 0.501 | 0.465 | 0.581818759506 | gnomAD-4.0.0 | 3.18241E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85812E-06 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.869 | likely_pathogenic | 0.7819 | pathogenic | -1.81 | Destabilizing | 0.999 | D | 0.501 | neutral | N | 0.483262655 | None | None | N |
V/C | 0.972 | likely_pathogenic | 0.9626 | pathogenic | -1.389 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
V/D | 0.9989 | likely_pathogenic | 0.9979 | pathogenic | -1.821 | Destabilizing | 1.0 | D | 0.861 | deleterious | N | 0.509778655 | None | None | N |
V/E | 0.993 | likely_pathogenic | 0.9876 | pathogenic | -1.62 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
V/F | 0.7959 | likely_pathogenic | 0.6446 | pathogenic | -0.978 | Destabilizing | 1.0 | D | 0.801 | deleterious | N | 0.492175714 | None | None | N |
V/G | 0.9754 | likely_pathogenic | 0.9552 | pathogenic | -2.339 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | N | 0.511801625 | None | None | N |
V/H | 0.9979 | likely_pathogenic | 0.9959 | pathogenic | -1.902 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
V/I | 0.1155 | likely_benign | 0.1013 | benign | -0.358 | Destabilizing | 0.11 | N | 0.209 | neutral | N | 0.448499507 | None | None | N |
V/K | 0.9943 | likely_pathogenic | 0.99 | pathogenic | -1.517 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
V/L | 0.66 | likely_pathogenic | 0.5169 | ambiguous | -0.358 | Destabilizing | 0.968 | D | 0.477 | neutral | N | 0.49182621 | None | None | N |
V/M | 0.6389 | likely_pathogenic | 0.4945 | ambiguous | -0.428 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
V/N | 0.9967 | likely_pathogenic | 0.9935 | pathogenic | -1.736 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
V/P | 0.998 | likely_pathogenic | 0.9967 | pathogenic | -0.812 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
V/Q | 0.9915 | likely_pathogenic | 0.9845 | pathogenic | -1.584 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
V/R | 0.9892 | likely_pathogenic | 0.9809 | pathogenic | -1.363 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
V/S | 0.9838 | likely_pathogenic | 0.9699 | pathogenic | -2.433 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
V/T | 0.9053 | likely_pathogenic | 0.8612 | pathogenic | -2.072 | Highly Destabilizing | 0.997 | D | 0.609 | neutral | None | None | None | None | N |
V/W | 0.9972 | likely_pathogenic | 0.9935 | pathogenic | -1.369 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
V/Y | 0.9885 | likely_pathogenic | 0.9762 | pathogenic | -0.988 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.