Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33686 | 101281;101282;101283 | chr2:178535559;178535558;178535557 | chr2:179400286;179400285;179400284 |
N2AB | 32045 | 96358;96359;96360 | chr2:178535559;178535558;178535557 | chr2:179400286;179400285;179400284 |
N2A | 31118 | 93577;93578;93579 | chr2:178535559;178535558;178535557 | chr2:179400286;179400285;179400284 |
N2B | 24621 | 74086;74087;74088 | chr2:178535559;178535558;178535557 | chr2:179400286;179400285;179400284 |
Novex-1 | 24746 | 74461;74462;74463 | chr2:178535559;178535558;178535557 | chr2:179400286;179400285;179400284 |
Novex-2 | 24813 | 74662;74663;74664 | chr2:178535559;178535558;178535557 | chr2:179400286;179400285;179400284 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs1194467385 | None | 1.0 | D | 0.859 | 0.672 | 0.713529394019 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 2.41E-05 | 6.54E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/M | rs1194467385 | None | 1.0 | D | 0.859 | 0.672 | 0.713529394019 | gnomAD-4.0.0 | 1.31385E-05 | None | None | None | None | N | None | 2.41196E-05 | 6.54365E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9155 | likely_pathogenic | 0.8538 | pathogenic | -1.792 | Destabilizing | 1.0 | D | 0.793 | deleterious | D | 0.596462693 | None | None | N |
V/C | 0.9882 | likely_pathogenic | 0.9799 | pathogenic | -1.484 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
V/D | 0.9989 | likely_pathogenic | 0.9966 | pathogenic | -2.281 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
V/E | 0.9966 | likely_pathogenic | 0.9906 | pathogenic | -2.265 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | D | 0.597068106 | None | None | N |
V/F | 0.982 | likely_pathogenic | 0.9362 | pathogenic | -1.483 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
V/G | 0.9785 | likely_pathogenic | 0.9559 | pathogenic | -2.119 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | D | 0.597068106 | None | None | N |
V/H | 0.9995 | likely_pathogenic | 0.9984 | pathogenic | -1.603 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
V/I | 0.2048 | likely_benign | 0.1429 | benign | -0.969 | Destabilizing | 0.994 | D | 0.697 | prob.neutral | None | None | None | None | N |
V/K | 0.9982 | likely_pathogenic | 0.9943 | pathogenic | -1.449 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
V/L | 0.9545 | likely_pathogenic | 0.8883 | pathogenic | -0.969 | Destabilizing | 0.993 | D | 0.776 | deleterious | D | 0.578193125 | None | None | N |
V/M | 0.9387 | likely_pathogenic | 0.8377 | pathogenic | -0.841 | Destabilizing | 1.0 | D | 0.859 | deleterious | D | 0.596664498 | None | None | N |
V/N | 0.9965 | likely_pathogenic | 0.9906 | pathogenic | -1.391 | Destabilizing | 0.999 | D | 0.863 | deleterious | None | None | None | None | N |
V/P | 0.9952 | likely_pathogenic | 0.9921 | pathogenic | -1.212 | Destabilizing | 0.999 | D | 0.851 | deleterious | None | None | None | None | N |
V/Q | 0.9979 | likely_pathogenic | 0.9939 | pathogenic | -1.603 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
V/R | 0.9962 | likely_pathogenic | 0.9889 | pathogenic | -0.909 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
V/S | 0.9796 | likely_pathogenic | 0.9561 | pathogenic | -1.876 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
V/T | 0.8821 | likely_pathogenic | 0.8262 | pathogenic | -1.757 | Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
V/W | 0.9998 | likely_pathogenic | 0.9992 | pathogenic | -1.688 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
V/Y | 0.9989 | likely_pathogenic | 0.9953 | pathogenic | -1.394 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.