Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33691 | 101296;101297;101298 | chr2:178535544;178535543;178535542 | chr2:179400271;179400270;179400269 |
N2AB | 32050 | 96373;96374;96375 | chr2:178535544;178535543;178535542 | chr2:179400271;179400270;179400269 |
N2A | 31123 | 93592;93593;93594 | chr2:178535544;178535543;178535542 | chr2:179400271;179400270;179400269 |
N2B | 24626 | 74101;74102;74103 | chr2:178535544;178535543;178535542 | chr2:179400271;179400270;179400269 |
Novex-1 | 24751 | 74476;74477;74478 | chr2:178535544;178535543;178535542 | chr2:179400271;179400270;179400269 |
Novex-2 | 24818 | 74677;74678;74679 | chr2:178535544;178535543;178535542 | chr2:179400271;179400270;179400269 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs1342398434 | -0.733 | 0.12 | N | 0.485 | 0.114 | 0.190952846119 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
D/E | rs1342398434 | -0.733 | 0.12 | N | 0.485 | 0.114 | 0.190952846119 | gnomAD-4.0.0 | 3.18235E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71595E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.4248 | ambiguous | 0.3018 | benign | -0.409 | Destabilizing | 0.997 | D | 0.853 | deleterious | N | 0.476154951 | None | None | N |
D/C | 0.8967 | likely_pathogenic | 0.8435 | pathogenic | -0.121 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
D/E | 0.3628 | ambiguous | 0.303 | benign | -0.826 | Destabilizing | 0.12 | N | 0.485 | neutral | N | 0.507091159 | None | None | N |
D/F | 0.8761 | likely_pathogenic | 0.815 | pathogenic | -0.488 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
D/G | 0.5548 | ambiguous | 0.4241 | ambiguous | -0.717 | Destabilizing | 0.993 | D | 0.827 | deleterious | N | 0.456374337 | None | None | N |
D/H | 0.7616 | likely_pathogenic | 0.6404 | pathogenic | -0.901 | Destabilizing | 1.0 | D | 0.841 | deleterious | N | 0.486830148 | None | None | N |
D/I | 0.8604 | likely_pathogenic | 0.7672 | pathogenic | 0.385 | Stabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
D/K | 0.8947 | likely_pathogenic | 0.7823 | pathogenic | -0.347 | Destabilizing | 0.999 | D | 0.848 | deleterious | None | None | None | None | N |
D/L | 0.7347 | likely_pathogenic | 0.6137 | pathogenic | 0.385 | Stabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
D/M | 0.9076 | likely_pathogenic | 0.8519 | pathogenic | 0.832 | Stabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
D/N | 0.2967 | likely_benign | 0.2206 | benign | -0.616 | Destabilizing | 0.997 | D | 0.86 | deleterious | N | 0.520983176 | None | None | N |
D/P | 0.9847 | likely_pathogenic | 0.9719 | pathogenic | 0.146 | Stabilizing | 0.995 | D | 0.861 | deleterious | None | None | None | None | N |
D/Q | 0.7976 | likely_pathogenic | 0.6638 | pathogenic | -0.521 | Destabilizing | 0.998 | D | 0.867 | deleterious | None | None | None | None | N |
D/R | 0.9134 | likely_pathogenic | 0.8237 | pathogenic | -0.357 | Destabilizing | 0.999 | D | 0.889 | deleterious | None | None | None | None | N |
D/S | 0.3025 | likely_benign | 0.2119 | benign | -0.852 | Destabilizing | 0.992 | D | 0.801 | deleterious | None | None | None | None | N |
D/T | 0.7072 | likely_pathogenic | 0.565 | pathogenic | -0.607 | Destabilizing | 0.997 | D | 0.873 | deleterious | None | None | None | None | N |
D/V | 0.685 | likely_pathogenic | 0.5599 | ambiguous | 0.146 | Stabilizing | 0.998 | D | 0.878 | deleterious | N | 0.492906534 | None | None | N |
D/W | 0.9837 | likely_pathogenic | 0.9729 | pathogenic | -0.482 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
D/Y | 0.6184 | likely_pathogenic | 0.4877 | ambiguous | -0.288 | Destabilizing | 1.0 | D | 0.875 | deleterious | N | 0.486576658 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.