Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33692 | 101299;101300;101301 | chr2:178535541;178535540;178535539 | chr2:179400268;179400267;179400266 |
N2AB | 32051 | 96376;96377;96378 | chr2:178535541;178535540;178535539 | chr2:179400268;179400267;179400266 |
N2A | 31124 | 93595;93596;93597 | chr2:178535541;178535540;178535539 | chr2:179400268;179400267;179400266 |
N2B | 24627 | 74104;74105;74106 | chr2:178535541;178535540;178535539 | chr2:179400268;179400267;179400266 |
Novex-1 | 24752 | 74479;74480;74481 | chr2:178535541;178535540;178535539 | chr2:179400268;179400267;179400266 |
Novex-2 | 24819 | 74680;74681;74682 | chr2:178535541;178535540;178535539 | chr2:179400268;179400267;179400266 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | rs755832382 | -0.729 | 0.973 | N | 0.867 | 0.418 | 0.60087810649 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.65618E-04 |
P/R | rs755832382 | -0.729 | 0.973 | N | 0.867 | 0.418 | 0.60087810649 | gnomAD-4.0.0 | 1.59118E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41196E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1083 | likely_benign | 0.1256 | benign | -1.635 | Destabilizing | 0.005 | N | 0.457 | neutral | N | 0.466124397 | None | None | N |
P/C | 0.7376 | likely_pathogenic | 0.7245 | pathogenic | -1.272 | Destabilizing | 0.989 | D | 0.855 | deleterious | None | None | None | None | N |
P/D | 0.9491 | likely_pathogenic | 0.9458 | pathogenic | -2.24 | Highly Destabilizing | 0.489 | N | 0.844 | deleterious | None | None | None | None | N |
P/E | 0.7737 | likely_pathogenic | 0.7381 | pathogenic | -2.258 | Highly Destabilizing | 0.603 | D | 0.835 | deleterious | None | None | None | None | N |
P/F | 0.8683 | likely_pathogenic | 0.8575 | pathogenic | -1.447 | Destabilizing | 0.99 | D | 0.879 | deleterious | None | None | None | None | N |
P/G | 0.6787 | likely_pathogenic | 0.7035 | pathogenic | -1.92 | Destabilizing | 0.583 | D | 0.797 | deleterious | None | None | None | None | N |
P/H | 0.6555 | likely_pathogenic | 0.6304 | pathogenic | -1.4 | Destabilizing | 0.993 | D | 0.847 | deleterious | None | None | None | None | N |
P/I | 0.7137 | likely_pathogenic | 0.6581 | pathogenic | -0.943 | Destabilizing | 0.99 | D | 0.873 | deleterious | None | None | None | None | N |
P/K | 0.8013 | likely_pathogenic | 0.7177 | pathogenic | -1.333 | Destabilizing | 0.96 | D | 0.838 | deleterious | None | None | None | None | N |
P/L | 0.4813 | ambiguous | 0.4577 | ambiguous | -0.943 | Destabilizing | 0.912 | D | 0.83 | deleterious | N | 0.514595641 | None | None | N |
P/M | 0.7312 | likely_pathogenic | 0.7283 | pathogenic | -0.71 | Destabilizing | 0.998 | D | 0.847 | deleterious | None | None | None | None | N |
P/N | 0.8663 | likely_pathogenic | 0.8584 | pathogenic | -1.242 | Destabilizing | 0.751 | D | 0.868 | deleterious | None | None | None | None | N |
P/Q | 0.5292 | ambiguous | 0.5026 | ambiguous | -1.512 | Destabilizing | 0.932 | D | 0.819 | deleterious | N | 0.480068972 | None | None | N |
P/R | 0.6338 | likely_pathogenic | 0.5282 | ambiguous | -0.72 | Destabilizing | 0.973 | D | 0.867 | deleterious | N | 0.486830148 | None | None | N |
P/S | 0.3188 | likely_benign | 0.3245 | benign | -1.661 | Destabilizing | 0.083 | N | 0.563 | neutral | N | 0.475207126 | None | None | N |
P/T | 0.4107 | ambiguous | 0.3767 | ambiguous | -1.583 | Destabilizing | 0.394 | N | 0.83 | deleterious | N | 0.502567773 | None | None | N |
P/V | 0.5551 | ambiguous | 0.5159 | ambiguous | -1.142 | Destabilizing | 0.708 | D | 0.839 | deleterious | None | None | None | None | N |
P/W | 0.9615 | likely_pathogenic | 0.9554 | pathogenic | -1.629 | Destabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | N |
P/Y | 0.8874 | likely_pathogenic | 0.8619 | pathogenic | -1.338 | Destabilizing | 0.997 | D | 0.879 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.