Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33706 | 101341;101342;101343 | chr2:178535499;178535498;178535497 | chr2:179400226;179400225;179400224 |
N2AB | 32065 | 96418;96419;96420 | chr2:178535499;178535498;178535497 | chr2:179400226;179400225;179400224 |
N2A | 31138 | 93637;93638;93639 | chr2:178535499;178535498;178535497 | chr2:179400226;179400225;179400224 |
N2B | 24641 | 74146;74147;74148 | chr2:178535499;178535498;178535497 | chr2:179400226;179400225;179400224 |
Novex-1 | 24766 | 74521;74522;74523 | chr2:178535499;178535498;178535497 | chr2:179400226;179400225;179400224 |
Novex-2 | 24833 | 74722;74723;74724 | chr2:178535499;178535498;178535497 | chr2:179400226;179400225;179400224 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1261733710 | -2.657 | 0.005 | N | 0.374 | 0.141 | 0.316494231283 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
V/A | rs1261733710 | -2.657 | 0.005 | N | 0.374 | 0.141 | 0.316494231283 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
V/L | None | None | 0.107 | N | 0.523 | 0.09 | 0.278968121808 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5748 | likely_pathogenic | 0.5299 | ambiguous | -2.315 | Highly Destabilizing | 0.005 | N | 0.374 | neutral | N | 0.499415825 | None | None | N |
V/C | 0.8518 | likely_pathogenic | 0.8595 | pathogenic | -2.68 | Highly Destabilizing | 0.981 | D | 0.785 | deleterious | None | None | None | None | N |
V/D | 0.9976 | likely_pathogenic | 0.9973 | pathogenic | -2.987 | Highly Destabilizing | 0.997 | D | 0.875 | deleterious | D | 0.528967368 | None | None | N |
V/E | 0.991 | likely_pathogenic | 0.9894 | pathogenic | -2.761 | Highly Destabilizing | 0.988 | D | 0.867 | deleterious | None | None | None | None | N |
V/F | 0.8671 | likely_pathogenic | 0.8068 | pathogenic | -1.62 | Destabilizing | 0.98 | D | 0.846 | deleterious | N | 0.514911583 | None | None | N |
V/G | 0.893 | likely_pathogenic | 0.8747 | pathogenic | -2.84 | Highly Destabilizing | 0.894 | D | 0.841 | deleterious | N | 0.505076215 | None | None | N |
V/H | 0.9971 | likely_pathogenic | 0.9971 | pathogenic | -2.54 | Highly Destabilizing | 0.995 | D | 0.843 | deleterious | None | None | None | None | N |
V/I | 0.1232 | likely_benign | 0.1171 | benign | -0.836 | Destabilizing | None | N | 0.241 | neutral | N | 0.458875925 | None | None | N |
V/K | 0.9923 | likely_pathogenic | 0.9918 | pathogenic | -1.961 | Destabilizing | 0.994 | D | 0.866 | deleterious | None | None | None | None | N |
V/L | 0.5112 | ambiguous | 0.4548 | ambiguous | -0.836 | Destabilizing | 0.107 | N | 0.523 | neutral | N | 0.495292511 | None | None | N |
V/M | 0.5758 | likely_pathogenic | 0.4754 | ambiguous | -1.304 | Destabilizing | 0.979 | D | 0.698 | prob.neutral | None | None | None | None | N |
V/N | 0.9887 | likely_pathogenic | 0.9887 | pathogenic | -2.415 | Highly Destabilizing | 0.982 | D | 0.871 | deleterious | None | None | None | None | N |
V/P | 0.9973 | likely_pathogenic | 0.9978 | pathogenic | -1.305 | Destabilizing | 0.982 | D | 0.849 | deleterious | None | None | None | None | N |
V/Q | 0.9856 | likely_pathogenic | 0.9844 | pathogenic | -2.258 | Highly Destabilizing | 0.996 | D | 0.848 | deleterious | None | None | None | None | N |
V/R | 0.9843 | likely_pathogenic | 0.9835 | pathogenic | -1.802 | Destabilizing | 0.997 | D | 0.868 | deleterious | None | None | None | None | N |
V/S | 0.9177 | likely_pathogenic | 0.913 | pathogenic | -3.083 | Highly Destabilizing | 0.771 | D | 0.848 | deleterious | None | None | None | None | N |
V/T | 0.7953 | likely_pathogenic | 0.774 | pathogenic | -2.699 | Highly Destabilizing | 0.279 | N | 0.709 | prob.delet. | None | None | None | None | N |
V/W | 0.998 | likely_pathogenic | 0.9975 | pathogenic | -2.006 | Highly Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | N |
V/Y | 0.9904 | likely_pathogenic | 0.9873 | pathogenic | -1.677 | Destabilizing | 0.987 | D | 0.812 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.