Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33707 | 101344;101345;101346 | chr2:178535496;178535495;178535494 | chr2:179400223;179400222;179400221 |
N2AB | 32066 | 96421;96422;96423 | chr2:178535496;178535495;178535494 | chr2:179400223;179400222;179400221 |
N2A | 31139 | 93640;93641;93642 | chr2:178535496;178535495;178535494 | chr2:179400223;179400222;179400221 |
N2B | 24642 | 74149;74150;74151 | chr2:178535496;178535495;178535494 | chr2:179400223;179400222;179400221 |
Novex-1 | 24767 | 74524;74525;74526 | chr2:178535496;178535495;178535494 | chr2:179400223;179400222;179400221 |
Novex-2 | 24834 | 74725;74726;74727 | chr2:178535496;178535495;178535494 | chr2:179400223;179400222;179400221 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs1691011936 | None | 0.13 | N | 0.299 | 0.117 | 0.154104182512 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2592 | likely_benign | 0.2742 | benign | -0.771 | Destabilizing | 0.252 | N | 0.479 | neutral | None | None | None | None | N |
N/C | 0.2214 | likely_benign | 0.2372 | benign | -0.248 | Destabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | N |
N/D | 0.2504 | likely_benign | 0.2527 | benign | -1.438 | Destabilizing | 0.792 | D | 0.493 | neutral | N | 0.471034358 | None | None | N |
N/E | 0.4963 | ambiguous | 0.5368 | ambiguous | -1.344 | Destabilizing | 0.944 | D | 0.439 | neutral | None | None | None | None | N |
N/F | 0.4806 | ambiguous | 0.5119 | ambiguous | -0.783 | Destabilizing | 0.999 | D | 0.593 | neutral | None | None | None | None | N |
N/G | 0.4466 | ambiguous | 0.4563 | ambiguous | -1.077 | Destabilizing | 0.946 | D | 0.454 | neutral | None | None | None | None | N |
N/H | 0.1053 | likely_benign | 0.1078 | benign | -0.929 | Destabilizing | 0.997 | D | 0.459 | neutral | N | 0.495468656 | None | None | N |
N/I | 0.1539 | likely_benign | 0.1698 | benign | -0.006 | Destabilizing | 0.984 | D | 0.572 | neutral | N | 0.451293804 | None | None | N |
N/K | 0.4343 | ambiguous | 0.4222 | ambiguous | -0.233 | Destabilizing | 0.979 | D | 0.441 | neutral | N | 0.435401632 | None | None | N |
N/L | 0.2119 | likely_benign | 0.2261 | benign | -0.006 | Destabilizing | 0.959 | D | 0.509 | neutral | None | None | None | None | N |
N/M | 0.2802 | likely_benign | 0.3108 | benign | 0.515 | Stabilizing | 0.999 | D | 0.553 | neutral | None | None | None | None | N |
N/P | 0.9255 | likely_pathogenic | 0.9149 | pathogenic | -0.232 | Destabilizing | 0.973 | D | 0.551 | neutral | None | None | None | None | N |
N/Q | 0.3775 | ambiguous | 0.3911 | ambiguous | -1.138 | Destabilizing | 0.994 | D | 0.451 | neutral | None | None | None | None | N |
N/R | 0.4319 | ambiguous | 0.4123 | ambiguous | -0.152 | Destabilizing | 0.998 | D | 0.439 | neutral | None | None | None | None | N |
N/S | 0.0807 | likely_benign | 0.0836 | benign | -0.936 | Destabilizing | 0.13 | N | 0.299 | neutral | N | 0.434284124 | None | None | N |
N/T | 0.0915 | likely_benign | 0.1029 | benign | -0.67 | Destabilizing | 0.032 | N | 0.265 | neutral | N | 0.350012089 | None | None | N |
N/V | 0.167 | likely_benign | 0.1849 | benign | -0.232 | Destabilizing | 0.663 | D | 0.509 | neutral | None | None | None | None | N |
N/W | 0.7793 | likely_pathogenic | 0.7889 | pathogenic | -0.612 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | N |
N/Y | 0.1622 | likely_benign | 0.1749 | benign | -0.306 | Destabilizing | 0.999 | D | 0.566 | neutral | N | 0.452795314 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.