Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33711 | 101356;101357;101358 | chr2:178535484;178535483;178535482 | chr2:179400211;179400210;179400209 |
N2AB | 32070 | 96433;96434;96435 | chr2:178535484;178535483;178535482 | chr2:179400211;179400210;179400209 |
N2A | 31143 | 93652;93653;93654 | chr2:178535484;178535483;178535482 | chr2:179400211;179400210;179400209 |
N2B | 24646 | 74161;74162;74163 | chr2:178535484;178535483;178535482 | chr2:179400211;179400210;179400209 |
Novex-1 | 24771 | 74536;74537;74538 | chr2:178535484;178535483;178535482 | chr2:179400211;179400210;179400209 |
Novex-2 | 24838 | 74737;74738;74739 | chr2:178535484;178535483;178535482 | chr2:179400211;179400210;179400209 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1248094195 | 0.06 | 0.001 | N | 0.188 | 0.142 | 0.202086224978 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
T/S | None | None | 0.003 | N | 0.213 | 0.073 | 0.134241683229 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0841 | likely_benign | 0.0846 | benign | -0.893 | Destabilizing | None | N | 0.083 | neutral | N | 0.471325147 | None | None | N |
T/C | 0.3337 | likely_benign | 0.3407 | ambiguous | -0.611 | Destabilizing | 0.906 | D | 0.459 | neutral | None | None | None | None | N |
T/D | 0.2909 | likely_benign | 0.3213 | benign | -0.485 | Destabilizing | 0.026 | N | 0.311 | neutral | None | None | None | None | N |
T/E | 0.2137 | likely_benign | 0.2228 | benign | -0.459 | Destabilizing | 0.001 | N | 0.168 | neutral | None | None | None | None | N |
T/F | 0.2574 | likely_benign | 0.2567 | benign | -0.853 | Destabilizing | 0.848 | D | 0.615 | neutral | None | None | None | None | N |
T/G | 0.2459 | likely_benign | 0.2478 | benign | -1.183 | Destabilizing | 0.181 | N | 0.293 | neutral | None | None | None | None | N |
T/H | 0.2343 | likely_benign | 0.2457 | benign | -1.456 | Destabilizing | 0.676 | D | 0.515 | neutral | None | None | None | None | N |
T/I | 0.1359 | likely_benign | 0.1361 | benign | -0.202 | Destabilizing | 0.001 | N | 0.188 | neutral | N | 0.482619576 | None | None | N |
T/K | 0.1784 | likely_benign | 0.1755 | benign | -0.864 | Destabilizing | 0.11 | N | 0.317 | neutral | None | None | None | None | N |
T/L | 0.0925 | likely_benign | 0.0929 | benign | -0.202 | Destabilizing | 0.051 | N | 0.258 | neutral | None | None | None | None | N |
T/M | 0.083 | likely_benign | 0.0831 | benign | 0.047 | Stabilizing | 0.676 | D | 0.465 | neutral | None | None | None | None | N |
T/N | 0.0993 | likely_benign | 0.1109 | benign | -0.89 | Destabilizing | None | N | 0.083 | neutral | N | 0.474037378 | None | None | N |
T/P | 0.3706 | ambiguous | 0.3609 | ambiguous | -0.4 | Destabilizing | 0.164 | N | 0.409 | neutral | N | 0.483298202 | None | None | N |
T/Q | 0.1804 | likely_benign | 0.1826 | benign | -1.013 | Destabilizing | 0.011 | N | 0.233 | neutral | None | None | None | None | N |
T/R | 0.1635 | likely_benign | 0.149 | benign | -0.657 | Destabilizing | 0.614 | D | 0.356 | neutral | None | None | None | None | N |
T/S | 0.104 | likely_benign | 0.1109 | benign | -1.152 | Destabilizing | 0.003 | N | 0.213 | neutral | N | 0.432091968 | None | None | N |
T/V | 0.11 | likely_benign | 0.1117 | benign | -0.4 | Destabilizing | 0.002 | N | 0.104 | neutral | None | None | None | None | N |
T/W | 0.582 | likely_pathogenic | 0.5601 | ambiguous | -0.804 | Destabilizing | 0.992 | D | 0.521 | neutral | None | None | None | None | N |
T/Y | 0.3106 | likely_benign | 0.3011 | benign | -0.572 | Destabilizing | 0.972 | D | 0.615 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.