Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33712 | 101359;101360;101361 | chr2:178535481;178535480;178535479 | chr2:179400208;179400207;179400206 |
N2AB | 32071 | 96436;96437;96438 | chr2:178535481;178535480;178535479 | chr2:179400208;179400207;179400206 |
N2A | 31144 | 93655;93656;93657 | chr2:178535481;178535480;178535479 | chr2:179400208;179400207;179400206 |
N2B | 24647 | 74164;74165;74166 | chr2:178535481;178535480;178535479 | chr2:179400208;179400207;179400206 |
Novex-1 | 24772 | 74539;74540;74541 | chr2:178535481;178535480;178535479 | chr2:179400208;179400207;179400206 |
Novex-2 | 24839 | 74740;74741;74742 | chr2:178535481;178535480;178535479 | chr2:179400208;179400207;179400206 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1060503937 | -0.864 | 0.062 | N | 0.492 | 0.042 | 0.221734844693 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/D | rs1060503937 | -0.864 | 0.062 | N | 0.492 | 0.042 | 0.221734844693 | gnomAD-4.0.0 | 6.84207E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15931E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0807 | likely_benign | 0.0831 | benign | -0.247 | Destabilizing | 0.001 | N | 0.245 | neutral | N | 0.378622843 | None | None | N |
E/C | 0.8103 | likely_pathogenic | 0.8065 | pathogenic | -0.271 | Destabilizing | 0.956 | D | 0.539 | neutral | None | None | None | None | N |
E/D | 0.2254 | likely_benign | 0.2476 | benign | -1.255 | Destabilizing | 0.062 | N | 0.492 | neutral | N | 0.519655025 | None | None | N |
E/F | 0.7996 | likely_pathogenic | 0.7915 | pathogenic | 0.558 | Stabilizing | 0.915 | D | 0.545 | neutral | None | None | None | None | N |
E/G | 0.1793 | likely_benign | 0.1888 | benign | -0.653 | Destabilizing | 0.506 | D | 0.467 | neutral | N | 0.449909725 | None | None | N |
E/H | 0.5924 | likely_pathogenic | 0.5828 | pathogenic | 0.424 | Stabilizing | 0.959 | D | 0.573 | neutral | None | None | None | None | N |
E/I | 0.3646 | ambiguous | 0.3458 | ambiguous | 0.862 | Stabilizing | 0.712 | D | 0.577 | neutral | None | None | None | None | N |
E/K | 0.1648 | likely_benign | 0.1475 | benign | -0.241 | Destabilizing | 0.532 | D | 0.517 | neutral | N | 0.434401555 | None | None | N |
E/L | 0.353 | ambiguous | 0.3695 | ambiguous | 0.862 | Stabilizing | 0.414 | N | 0.524 | neutral | None | None | None | None | N |
E/M | 0.4447 | ambiguous | 0.4422 | ambiguous | 1.064 | Stabilizing | 0.912 | D | 0.537 | neutral | None | None | None | None | N |
E/N | 0.3672 | ambiguous | 0.3905 | ambiguous | -0.977 | Destabilizing | 0.7 | D | 0.573 | neutral | None | None | None | None | N |
E/P | 0.1693 | likely_benign | 0.1901 | benign | 0.516 | Stabilizing | None | N | 0.246 | neutral | None | None | None | None | N |
E/Q | 0.1508 | likely_benign | 0.1451 | benign | -0.745 | Destabilizing | 0.623 | D | 0.548 | neutral | N | 0.43455627 | None | None | N |
E/R | 0.3109 | likely_benign | 0.2656 | benign | 0.091 | Stabilizing | 0.915 | D | 0.571 | neutral | None | None | None | None | N |
E/S | 0.1885 | likely_benign | 0.1987 | benign | -1.22 | Destabilizing | 0.144 | N | 0.501 | neutral | None | None | None | None | N |
E/T | 0.2224 | likely_benign | 0.2267 | benign | -0.86 | Destabilizing | 0.529 | D | 0.503 | neutral | None | None | None | None | N |
E/V | 0.2031 | likely_benign | 0.1903 | benign | 0.516 | Stabilizing | 0.159 | N | 0.511 | neutral | N | 0.459702644 | None | None | N |
E/W | 0.9474 | likely_pathogenic | 0.9446 | pathogenic | 0.771 | Stabilizing | 0.997 | D | 0.631 | neutral | None | None | None | None | N |
E/Y | 0.7072 | likely_pathogenic | 0.6939 | pathogenic | 0.829 | Stabilizing | 0.989 | D | 0.543 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.