Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33719 | 101380;101381;101382 | chr2:178535460;178535459;178535458 | chr2:179400187;179400186;179400185 |
N2AB | 32078 | 96457;96458;96459 | chr2:178535460;178535459;178535458 | chr2:179400187;179400186;179400185 |
N2A | 31151 | 93676;93677;93678 | chr2:178535460;178535459;178535458 | chr2:179400187;179400186;179400185 |
N2B | 24654 | 74185;74186;74187 | chr2:178535460;178535459;178535458 | chr2:179400187;179400186;179400185 |
Novex-1 | 24779 | 74560;74561;74562 | chr2:178535460;178535459;178535458 | chr2:179400187;179400186;179400185 |
Novex-2 | 24846 | 74761;74762;74763 | chr2:178535460;178535459;178535458 | chr2:179400187;179400186;179400185 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | rs2154136682 | None | 1.0 | N | 0.739 | 0.547 | 0.40032279838 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2288 | likely_benign | 0.179 | benign | -0.838 | Destabilizing | 0.92 | D | 0.607 | neutral | None | None | None | None | N |
S/C | 0.1908 | likely_benign | 0.1507 | benign | -0.51 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | N | 0.478298226 | None | None | N |
S/D | 0.9059 | likely_pathogenic | 0.8576 | pathogenic | -0.107 | Destabilizing | 0.999 | D | 0.702 | prob.neutral | None | None | None | None | N |
S/E | 0.9032 | likely_pathogenic | 0.8638 | pathogenic | -0.116 | Destabilizing | 0.999 | D | 0.69 | prob.neutral | None | None | None | None | N |
S/F | 0.7138 | likely_pathogenic | 0.5834 | pathogenic | -1.105 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
S/G | 0.3573 | ambiguous | 0.2495 | benign | -1.069 | Destabilizing | 0.999 | D | 0.617 | neutral | N | 0.479047651 | None | None | N |
S/H | 0.7983 | likely_pathogenic | 0.7307 | pathogenic | -1.542 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
S/I | 0.7761 | likely_pathogenic | 0.6323 | pathogenic | -0.328 | Destabilizing | 1.0 | D | 0.763 | deleterious | N | 0.508301764 | None | None | N |
S/K | 0.9797 | likely_pathogenic | 0.9638 | pathogenic | -0.631 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
S/L | 0.4665 | ambiguous | 0.3315 | benign | -0.328 | Destabilizing | 0.999 | D | 0.702 | prob.neutral | None | None | None | None | N |
S/M | 0.6112 | likely_pathogenic | 0.4804 | ambiguous | 0.044 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
S/N | 0.6023 | likely_pathogenic | 0.4725 | ambiguous | -0.566 | Destabilizing | 0.985 | D | 0.701 | prob.neutral | N | 0.492172519 | None | None | N |
S/P | 0.9928 | likely_pathogenic | 0.9846 | pathogenic | -0.465 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
S/Q | 0.8761 | likely_pathogenic | 0.8196 | pathogenic | -0.739 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
S/R | 0.9606 | likely_pathogenic | 0.9295 | pathogenic | -0.534 | Destabilizing | 1.0 | D | 0.747 | deleterious | N | 0.491132108 | None | None | N |
S/T | 0.2941 | likely_benign | 0.2274 | benign | -0.635 | Destabilizing | 0.308 | N | 0.505 | neutral | N | 0.478093962 | None | None | N |
S/V | 0.6758 | likely_pathogenic | 0.5184 | ambiguous | -0.465 | Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
S/W | 0.7898 | likely_pathogenic | 0.7182 | pathogenic | -1.041 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
S/Y | 0.6301 | likely_pathogenic | 0.5157 | ambiguous | -0.787 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.