Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33720 | 101383;101384;101385 | chr2:178535457;178535456;178535455 | chr2:179400184;179400183;179400182 |
N2AB | 32079 | 96460;96461;96462 | chr2:178535457;178535456;178535455 | chr2:179400184;179400183;179400182 |
N2A | 31152 | 93679;93680;93681 | chr2:178535457;178535456;178535455 | chr2:179400184;179400183;179400182 |
N2B | 24655 | 74188;74189;74190 | chr2:178535457;178535456;178535455 | chr2:179400184;179400183;179400182 |
Novex-1 | 24780 | 74563;74564;74565 | chr2:178535457;178535456;178535455 | chr2:179400184;179400183;179400182 |
Novex-2 | 24847 | 74764;74765;74766 | chr2:178535457;178535456;178535455 | chr2:179400184;179400183;179400182 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs727503535 | 0.229 | None | N | 0.12 | 0.127 | 0.295623431141 | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | N | None | 0 | 1.45028E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/R | rs727503535 | 0.229 | None | N | 0.12 | 0.127 | 0.295623431141 | gnomAD-4.0.0 | 9.54678E-06 | None | None | None | None | N | None | 0 | 1.37206E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2893 | likely_benign | 0.2786 | benign | 0.023 | Stabilizing | 0.528 | D | 0.447 | neutral | None | None | None | None | N |
K/C | 0.7251 | likely_pathogenic | 0.6655 | pathogenic | -0.109 | Destabilizing | 0.996 | D | 0.469 | neutral | None | None | None | None | N |
K/D | 0.4931 | ambiguous | 0.5113 | ambiguous | 0.17 | Stabilizing | 0.008 | N | 0.217 | neutral | None | None | None | None | N |
K/E | 0.1668 | likely_benign | 0.1709 | benign | 0.182 | Stabilizing | 0.113 | N | 0.387 | neutral | N | 0.376910689 | None | None | N |
K/F | 0.8037 | likely_pathogenic | 0.7632 | pathogenic | -0.181 | Destabilizing | 0.959 | D | 0.471 | neutral | None | None | None | None | N |
K/G | 0.4499 | ambiguous | 0.4114 | ambiguous | -0.186 | Destabilizing | 0.528 | D | 0.481 | neutral | None | None | None | None | N |
K/H | 0.3479 | ambiguous | 0.3143 | benign | -0.504 | Destabilizing | 0.889 | D | 0.446 | neutral | None | None | None | None | N |
K/I | 0.3622 | ambiguous | 0.351 | ambiguous | 0.497 | Stabilizing | 0.3 | N | 0.499 | neutral | N | 0.485081091 | None | None | N |
K/L | 0.3907 | ambiguous | 0.365 | ambiguous | 0.497 | Stabilizing | 0.074 | N | 0.528 | neutral | None | None | None | None | N |
K/M | 0.3004 | likely_benign | 0.2785 | benign | 0.321 | Stabilizing | 0.964 | D | 0.438 | neutral | None | None | None | None | N |
K/N | 0.371 | ambiguous | 0.3825 | ambiguous | 0.325 | Stabilizing | 0.011 | N | 0.107 | neutral | N | 0.43446027 | None | None | N |
K/P | 0.3971 | ambiguous | 0.409 | ambiguous | 0.368 | Stabilizing | 0.983 | D | 0.448 | neutral | None | None | None | None | N |
K/Q | 0.1407 | likely_benign | 0.1296 | benign | 0.154 | Stabilizing | 0.198 | N | 0.407 | neutral | N | 0.451083161 | None | None | N |
K/R | 0.0818 | likely_benign | 0.0734 | benign | 0.022 | Stabilizing | None | N | 0.12 | neutral | N | 0.427534297 | None | None | N |
K/S | 0.3656 | ambiguous | 0.3512 | ambiguous | -0.185 | Destabilizing | 0.528 | D | 0.369 | neutral | None | None | None | None | N |
K/T | 0.1805 | likely_benign | 0.188 | benign | -0.018 | Destabilizing | 0.38 | N | 0.483 | neutral | N | 0.446600061 | None | None | N |
K/V | 0.3023 | likely_benign | 0.2997 | benign | 0.368 | Stabilizing | 0.427 | N | 0.473 | neutral | None | None | None | None | N |
K/W | 0.8218 | likely_pathogenic | 0.764 | pathogenic | -0.191 | Destabilizing | 0.997 | D | 0.549 | neutral | None | None | None | None | N |
K/Y | 0.6933 | likely_pathogenic | 0.6404 | pathogenic | 0.172 | Stabilizing | 0.732 | D | 0.483 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.