Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33729 | 101410;101411;101412 | chr2:178535430;178535429;178535428 | chr2:179400157;179400156;179400155 |
N2AB | 32088 | 96487;96488;96489 | chr2:178535430;178535429;178535428 | chr2:179400157;179400156;179400155 |
N2A | 31161 | 93706;93707;93708 | chr2:178535430;178535429;178535428 | chr2:179400157;179400156;179400155 |
N2B | 24664 | 74215;74216;74217 | chr2:178535430;178535429;178535428 | chr2:179400157;179400156;179400155 |
Novex-1 | 24789 | 74590;74591;74592 | chr2:178535430;178535429;178535428 | chr2:179400157;179400156;179400155 |
Novex-2 | 24856 | 74791;74792;74793 | chr2:178535430;178535429;178535428 | chr2:179400157;179400156;179400155 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | None | None | 0.999 | N | 0.707 | 0.403 | 0.704489790954 | gnomAD-4.0.0 | 1.59115E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85794E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.6825 | likely_pathogenic | 0.5882 | pathogenic | -1.378 | Destabilizing | 0.846 | D | 0.557 | neutral | None | None | None | None | N |
C/D | 0.9828 | likely_pathogenic | 0.9617 | pathogenic | -1.064 | Destabilizing | 0.977 | D | 0.773 | deleterious | None | None | None | None | N |
C/E | 0.9576 | likely_pathogenic | 0.9091 | pathogenic | -0.828 | Destabilizing | 0.984 | D | 0.756 | deleterious | None | None | None | None | N |
C/F | 0.7021 | likely_pathogenic | 0.5106 | ambiguous | -0.849 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | N | 0.465204464 | None | None | N |
C/G | 0.6074 | likely_pathogenic | 0.4675 | ambiguous | -1.731 | Destabilizing | 0.981 | D | 0.733 | prob.delet. | N | 0.486888919 | None | None | N |
C/H | 0.761 | likely_pathogenic | 0.6252 | pathogenic | -2.035 | Highly Destabilizing | 0.998 | D | 0.759 | deleterious | None | None | None | None | N |
C/I | 0.8816 | likely_pathogenic | 0.7872 | pathogenic | -0.425 | Destabilizing | 0.997 | D | 0.658 | neutral | None | None | None | None | N |
C/K | 0.7869 | likely_pathogenic | 0.6602 | pathogenic | -0.61 | Destabilizing | 0.96 | D | 0.717 | prob.delet. | None | None | None | None | N |
C/L | 0.7839 | likely_pathogenic | 0.6517 | pathogenic | -0.425 | Destabilizing | 0.98 | D | 0.601 | neutral | None | None | None | None | N |
C/M | 0.8286 | likely_pathogenic | 0.7478 | pathogenic | 0.223 | Stabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | N |
C/N | 0.8425 | likely_pathogenic | 0.7662 | pathogenic | -1.185 | Destabilizing | 0.978 | D | 0.771 | deleterious | None | None | None | None | N |
C/P | 0.999 | likely_pathogenic | 0.9981 | pathogenic | -0.72 | Destabilizing | 0.992 | D | 0.771 | deleterious | None | None | None | None | N |
C/Q | 0.6275 | likely_pathogenic | 0.4983 | ambiguous | -0.69 | Destabilizing | 0.984 | D | 0.773 | deleterious | None | None | None | None | N |
C/R | 0.3893 | ambiguous | 0.2576 | benign | -1.185 | Destabilizing | 0.207 | N | 0.584 | neutral | N | 0.378756129 | None | None | N |
C/S | 0.6616 | likely_pathogenic | 0.555 | ambiguous | -1.46 | Destabilizing | 0.91 | D | 0.648 | neutral | N | 0.461334653 | None | None | N |
C/T | 0.8461 | likely_pathogenic | 0.7502 | pathogenic | -1.036 | Destabilizing | 0.963 | D | 0.643 | neutral | None | None | None | None | N |
C/V | 0.7741 | likely_pathogenic | 0.661 | pathogenic | -0.72 | Destabilizing | 0.973 | D | 0.638 | neutral | None | None | None | None | N |
C/W | 0.9166 | likely_pathogenic | 0.8033 | pathogenic | -1.26 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | N | 0.49315907 | None | None | N |
C/Y | 0.709 | likely_pathogenic | 0.513 | ambiguous | -1.008 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | N | 0.491524274 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.