Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33730 | 101413;101414;101415 | chr2:178535427;178535426;178535425 | chr2:179400154;179400153;179400152 |
N2AB | 32089 | 96490;96491;96492 | chr2:178535427;178535426;178535425 | chr2:179400154;179400153;179400152 |
N2A | 31162 | 93709;93710;93711 | chr2:178535427;178535426;178535425 | chr2:179400154;179400153;179400152 |
N2B | 24665 | 74218;74219;74220 | chr2:178535427;178535426;178535425 | chr2:179400154;179400153;179400152 |
Novex-1 | 24790 | 74593;74594;74595 | chr2:178535427;178535426;178535425 | chr2:179400154;179400153;179400152 |
Novex-2 | 24857 | 74794;74795;74796 | chr2:178535427;178535426;178535425 | chr2:179400154;179400153;179400152 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs1690988435 | None | 0.999 | N | 0.564 | 0.355 | 0.377097596864 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07383E-04 | 0 |
A/V | rs1690988435 | None | 0.999 | N | 0.564 | 0.355 | 0.377097596864 | gnomAD-4.0.0 | 2.56211E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.68025E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.797 | likely_pathogenic | 0.7083 | pathogenic | -1.004 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
A/D | 0.9307 | likely_pathogenic | 0.7958 | pathogenic | -0.885 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
A/E | 0.8725 | likely_pathogenic | 0.6836 | pathogenic | -0.96 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | N | 0.335717428 | None | None | N |
A/F | 0.8666 | likely_pathogenic | 0.7272 | pathogenic | -1.226 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
A/G | 0.4631 | ambiguous | 0.359 | ambiguous | -1.085 | Destabilizing | 0.99 | D | 0.469 | neutral | N | 0.429803811 | None | None | N |
A/H | 0.9078 | likely_pathogenic | 0.822 | pathogenic | -1.191 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
A/I | 0.76 | likely_pathogenic | 0.5892 | pathogenic | -0.531 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
A/K | 0.9607 | likely_pathogenic | 0.8831 | pathogenic | -0.972 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
A/L | 0.5276 | ambiguous | 0.3583 | ambiguous | -0.531 | Destabilizing | 1.0 | D | 0.654 | neutral | None | None | None | None | N |
A/M | 0.6705 | likely_pathogenic | 0.5219 | ambiguous | -0.449 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
A/N | 0.7468 | likely_pathogenic | 0.5966 | pathogenic | -0.66 | Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
A/P | 0.2013 | likely_benign | 0.2023 | benign | -0.612 | Destabilizing | 0.604 | D | 0.323 | neutral | N | 0.39792068 | None | None | N |
A/Q | 0.75 | likely_pathogenic | 0.61 | pathogenic | -0.893 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
A/R | 0.9193 | likely_pathogenic | 0.8101 | pathogenic | -0.615 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
A/S | 0.1881 | likely_benign | 0.148 | benign | -1.024 | Destabilizing | 0.986 | D | 0.487 | neutral | N | 0.380028352 | None | None | N |
A/T | 0.3458 | ambiguous | 0.2279 | benign | -1.007 | Destabilizing | 0.998 | D | 0.631 | neutral | N | 0.370139432 | None | None | N |
A/V | 0.5018 | ambiguous | 0.3381 | benign | -0.612 | Destabilizing | 0.999 | D | 0.564 | neutral | N | 0.429803811 | None | None | N |
A/W | 0.9837 | likely_pathogenic | 0.957 | pathogenic | -1.439 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
A/Y | 0.9432 | likely_pathogenic | 0.8603 | pathogenic | -1.06 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.