Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33734 | 101425;101426;101427 | chr2:178535415;178535414;178535413 | chr2:179400142;179400141;179400140 |
N2AB | 32093 | 96502;96503;96504 | chr2:178535415;178535414;178535413 | chr2:179400142;179400141;179400140 |
N2A | 31166 | 93721;93722;93723 | chr2:178535415;178535414;178535413 | chr2:179400142;179400141;179400140 |
N2B | 24669 | 74230;74231;74232 | chr2:178535415;178535414;178535413 | chr2:179400142;179400141;179400140 |
Novex-1 | 24794 | 74605;74606;74607 | chr2:178535415;178535414;178535413 | chr2:179400142;179400141;179400140 |
Novex-2 | 24861 | 74806;74807;74808 | chr2:178535415;178535414;178535413 | chr2:179400142;179400141;179400140 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.922 | N | 0.501 | 0.233 | 0.195762928549 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4528 | ambiguous | 0.3069 | benign | -0.008 | Destabilizing | 0.557 | D | 0.537 | neutral | N | 0.488737472 | None | None | N |
E/C | 0.9746 | likely_pathogenic | 0.9438 | pathogenic | -0.334 | Destabilizing | 0.993 | D | 0.694 | prob.neutral | None | None | None | None | N |
E/D | 0.1756 | likely_benign | 0.1641 | benign | -0.412 | Destabilizing | None | N | 0.331 | neutral | N | 0.463937815 | None | None | N |
E/F | 0.9714 | likely_pathogenic | 0.939 | pathogenic | -0.13 | Destabilizing | 0.996 | D | 0.623 | neutral | None | None | None | None | N |
E/G | 0.3002 | likely_benign | 0.195 | benign | -0.085 | Destabilizing | 0.807 | D | 0.443 | neutral | N | 0.441615529 | None | None | N |
E/H | 0.871 | likely_pathogenic | 0.767 | pathogenic | 0.551 | Stabilizing | 0.994 | D | 0.565 | neutral | None | None | None | None | N |
E/I | 0.8875 | likely_pathogenic | 0.7921 | pathogenic | 0.134 | Stabilizing | 0.911 | D | 0.633 | neutral | None | None | None | None | N |
E/K | 0.491 | ambiguous | 0.3227 | benign | 0.239 | Stabilizing | 0.699 | D | 0.514 | neutral | N | 0.446640133 | None | None | N |
E/L | 0.8445 | likely_pathogenic | 0.7301 | pathogenic | 0.134 | Stabilizing | 0.911 | D | 0.621 | neutral | None | None | None | None | N |
E/M | 0.8864 | likely_pathogenic | 0.7975 | pathogenic | -0.136 | Destabilizing | 0.955 | D | 0.599 | neutral | None | None | None | None | N |
E/N | 0.5044 | ambiguous | 0.3721 | ambiguous | 0.109 | Stabilizing | 0.541 | D | 0.512 | neutral | None | None | None | None | N |
E/P | 0.7615 | likely_pathogenic | 0.6059 | pathogenic | 0.102 | Stabilizing | 0.604 | D | 0.555 | neutral | None | None | None | None | N |
E/Q | 0.3951 | ambiguous | 0.2711 | benign | 0.092 | Stabilizing | 0.922 | D | 0.501 | neutral | N | 0.481136709 | None | None | N |
E/R | 0.6748 | likely_pathogenic | 0.4898 | ambiguous | 0.474 | Stabilizing | 0.956 | D | 0.551 | neutral | None | None | None | None | N |
E/S | 0.4213 | ambiguous | 0.2892 | benign | -0.051 | Destabilizing | 0.625 | D | 0.501 | neutral | None | None | None | None | N |
E/T | 0.5997 | likely_pathogenic | 0.4355 | ambiguous | 0.02 | Stabilizing | 0.89 | D | 0.534 | neutral | None | None | None | None | N |
E/V | 0.721 | likely_pathogenic | 0.5725 | pathogenic | 0.102 | Stabilizing | 0.846 | D | 0.573 | neutral | N | 0.495375443 | None | None | N |
E/W | 0.9888 | likely_pathogenic | 0.9736 | pathogenic | -0.122 | Destabilizing | 0.999 | D | 0.7 | prob.neutral | None | None | None | None | N |
E/Y | 0.9434 | likely_pathogenic | 0.8865 | pathogenic | 0.076 | Stabilizing | 0.999 | D | 0.584 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.