Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33737 | 101434;101435;101436 | chr2:178535406;178535405;178535404 | chr2:179400133;179400132;179400131 |
N2AB | 32096 | 96511;96512;96513 | chr2:178535406;178535405;178535404 | chr2:179400133;179400132;179400131 |
N2A | 31169 | 93730;93731;93732 | chr2:178535406;178535405;178535404 | chr2:179400133;179400132;179400131 |
N2B | 24672 | 74239;74240;74241 | chr2:178535406;178535405;178535404 | chr2:179400133;179400132;179400131 |
Novex-1 | 24797 | 74614;74615;74616 | chr2:178535406;178535405;178535404 | chr2:179400133;179400132;179400131 |
Novex-2 | 24864 | 74815;74816;74817 | chr2:178535406;178535405;178535404 | chr2:179400133;179400132;179400131 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1690979679 | None | 0.37 | N | 0.51 | 0.145 | 0.156986980423 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5716 | likely_pathogenic | 0.482 | ambiguous | -1.318 | Destabilizing | 0.218 | N | 0.519 | neutral | None | None | None | None | I |
L/C | 0.7827 | likely_pathogenic | 0.7169 | pathogenic | -0.681 | Destabilizing | 0.978 | D | 0.584 | neutral | None | None | None | None | I |
L/D | 0.9438 | likely_pathogenic | 0.9031 | pathogenic | -0.787 | Destabilizing | 0.798 | D | 0.632 | neutral | None | None | None | None | I |
L/E | 0.6886 | likely_pathogenic | 0.5529 | ambiguous | -0.81 | Destabilizing | 0.745 | D | 0.641 | neutral | None | None | None | None | I |
L/F | 0.3828 | ambiguous | 0.285 | benign | -0.924 | Destabilizing | 0.37 | N | 0.51 | neutral | N | 0.415701151 | None | None | I |
L/G | 0.8419 | likely_pathogenic | 0.796 | pathogenic | -1.594 | Destabilizing | 0.798 | D | 0.639 | neutral | None | None | None | None | I |
L/H | 0.6139 | likely_pathogenic | 0.485 | ambiguous | -0.762 | Destabilizing | 0.934 | D | 0.667 | neutral | N | 0.434209554 | None | None | I |
L/I | 0.0679 | likely_benign | 0.0641 | benign | -0.658 | Destabilizing | None | N | 0.12 | neutral | N | 0.387802473 | None | None | I |
L/K | 0.6534 | likely_pathogenic | 0.5202 | ambiguous | -0.882 | Destabilizing | 0.104 | N | 0.612 | neutral | None | None | None | None | I |
L/M | 0.1265 | likely_benign | 0.1169 | benign | -0.521 | Destabilizing | 0.189 | N | 0.53 | neutral | None | None | None | None | I |
L/N | 0.57 | likely_pathogenic | 0.4791 | ambiguous | -0.674 | Destabilizing | 0.923 | D | 0.641 | neutral | None | None | None | None | I |
L/P | 0.9719 | likely_pathogenic | 0.969 | pathogenic | -0.846 | Destabilizing | 0.901 | D | 0.64 | neutral | N | 0.488158682 | None | None | I |
L/Q | 0.3484 | ambiguous | 0.2481 | benign | -0.872 | Destabilizing | 0.833 | D | 0.607 | neutral | None | None | None | None | I |
L/R | 0.628 | likely_pathogenic | 0.5002 | ambiguous | -0.256 | Destabilizing | 0.543 | D | 0.607 | neutral | N | 0.411967412 | None | None | I |
L/S | 0.6681 | likely_pathogenic | 0.5598 | ambiguous | -1.204 | Destabilizing | 0.798 | D | 0.562 | neutral | None | None | None | None | I |
L/T | 0.4666 | ambiguous | 0.3623 | ambiguous | -1.12 | Destabilizing | 0.143 | N | 0.493 | neutral | None | None | None | None | I |
L/V | 0.1271 | likely_benign | 0.1057 | benign | -0.846 | Destabilizing | None | N | 0.152 | neutral | N | 0.378758916 | None | None | I |
L/W | 0.7061 | likely_pathogenic | 0.6068 | pathogenic | -0.984 | Destabilizing | 0.985 | D | 0.681 | prob.neutral | None | None | None | None | I |
L/Y | 0.698 | likely_pathogenic | 0.594 | pathogenic | -0.765 | Destabilizing | 0.156 | N | 0.55 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.