Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33745 | 101458;101459;101460 | chr2:178535382;178535381;178535380 | chr2:179400109;179400108;179400107 |
N2AB | 32104 | 96535;96536;96537 | chr2:178535382;178535381;178535380 | chr2:179400109;179400108;179400107 |
N2A | 31177 | 93754;93755;93756 | chr2:178535382;178535381;178535380 | chr2:179400109;179400108;179400107 |
N2B | 24680 | 74263;74264;74265 | chr2:178535382;178535381;178535380 | chr2:179400109;179400108;179400107 |
Novex-1 | 24805 | 74638;74639;74640 | chr2:178535382;178535381;178535380 | chr2:179400109;179400108;179400107 |
Novex-2 | 24872 | 74839;74840;74841 | chr2:178535382;178535381;178535380 | chr2:179400109;179400108;179400107 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/R | None | None | 0.999 | N | 0.622 | 0.401 | 0.591849201417 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1252 | likely_benign | 0.1732 | benign | -0.867 | Destabilizing | 0.341 | N | 0.37 | neutral | N | 0.515577356 | None | None | N |
T/C | 0.374 | ambiguous | 0.4144 | ambiguous | -0.418 | Destabilizing | 0.053 | N | 0.311 | neutral | None | None | None | None | N |
T/D | 0.6755 | likely_pathogenic | 0.8077 | pathogenic | -0.699 | Destabilizing | 0.991 | D | 0.575 | neutral | None | None | None | None | N |
T/E | 0.5388 | ambiguous | 0.6796 | pathogenic | -0.555 | Destabilizing | 0.997 | D | 0.577 | neutral | None | None | None | None | N |
T/F | 0.6799 | likely_pathogenic | 0.8339 | pathogenic | -0.628 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | N |
T/G | 0.3237 | likely_benign | 0.4461 | ambiguous | -1.246 | Destabilizing | 0.989 | D | 0.586 | neutral | None | None | None | None | N |
T/H | 0.4716 | ambiguous | 0.6588 | pathogenic | -1.381 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
T/I | 0.5163 | ambiguous | 0.6112 | pathogenic | 0.106 | Stabilizing | 0.992 | D | 0.562 | neutral | N | 0.47372955 | None | None | N |
T/K | 0.2094 | likely_benign | 0.3386 | benign | -0.428 | Destabilizing | 0.997 | D | 0.576 | neutral | N | 0.482427575 | None | None | N |
T/L | 0.1665 | likely_benign | 0.1971 | benign | 0.106 | Stabilizing | 0.96 | D | 0.475 | neutral | None | None | None | None | N |
T/M | 0.1276 | likely_benign | 0.1582 | benign | 0.088 | Stabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | N |
T/N | 0.1411 | likely_benign | 0.2346 | benign | -0.845 | Destabilizing | 0.991 | D | 0.491 | neutral | None | None | None | None | N |
T/P | 0.1332 | likely_benign | 0.1882 | benign | -0.186 | Destabilizing | 0.988 | D | 0.61 | neutral | N | 0.488950903 | None | None | N |
T/Q | 0.2745 | likely_benign | 0.3997 | ambiguous | -0.699 | Destabilizing | 0.996 | D | 0.639 | neutral | None | None | None | None | N |
T/R | 0.2222 | likely_benign | 0.3791 | ambiguous | -0.527 | Destabilizing | 0.999 | D | 0.622 | neutral | N | 0.48042742 | None | None | N |
T/S | 0.1946 | likely_benign | 0.3016 | benign | -1.107 | Destabilizing | 0.718 | D | 0.439 | neutral | N | 0.517886943 | None | None | N |
T/V | 0.3449 | ambiguous | 0.4122 | ambiguous | -0.186 | Destabilizing | 0.945 | D | 0.397 | neutral | None | None | None | None | N |
T/W | 0.8968 | likely_pathogenic | 0.9563 | pathogenic | -0.756 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
T/Y | 0.6348 | likely_pathogenic | 0.8148 | pathogenic | -0.392 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.