Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33762 | 101509;101510;101511 | chr2:178535331;178535330;178535329 | chr2:179400058;179400057;179400056 |
N2AB | 32121 | 96586;96587;96588 | chr2:178535331;178535330;178535329 | chr2:179400058;179400057;179400056 |
N2A | 31194 | 93805;93806;93807 | chr2:178535331;178535330;178535329 | chr2:179400058;179400057;179400056 |
N2B | 24697 | 74314;74315;74316 | chr2:178535331;178535330;178535329 | chr2:179400058;179400057;179400056 |
Novex-1 | 24822 | 74689;74690;74691 | chr2:178535331;178535330;178535329 | chr2:179400058;179400057;179400056 |
Novex-2 | 24889 | 74890;74891;74892 | chr2:178535331;178535330;178535329 | chr2:179400058;179400057;179400056 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1385559568 | None | 0.003 | N | 0.203 | 0.151 | 0.433047596574 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/I | rs1385559568 | None | 0.003 | N | 0.203 | 0.151 | 0.433047596574 | gnomAD-4.0.0 | 2.47863E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.39026E-06 | 0 | 0 |
V/L | rs1385559568 | None | 0.001 | N | 0.321 | 0.311 | 0.532359089423 | gnomAD-4.0.0 | 1.36837E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79886E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9373 | likely_pathogenic | 0.9581 | pathogenic | -2.516 | Highly Destabilizing | 0.675 | D | 0.571 | neutral | D | 0.567292014 | None | None | N |
V/C | 0.9686 | likely_pathogenic | 0.9787 | pathogenic | -1.917 | Destabilizing | 0.996 | D | 0.743 | deleterious | None | None | None | None | N |
V/D | 0.9986 | likely_pathogenic | 0.9991 | pathogenic | -3.457 | Highly Destabilizing | 0.999 | D | 0.905 | deleterious | None | None | None | None | N |
V/E | 0.9964 | likely_pathogenic | 0.9975 | pathogenic | -3.15 | Highly Destabilizing | 0.995 | D | 0.853 | deleterious | D | 0.629019336 | None | None | N |
V/F | 0.9506 | likely_pathogenic | 0.9492 | pathogenic | -1.376 | Destabilizing | 0.947 | D | 0.734 | prob.delet. | None | None | None | None | N |
V/G | 0.9643 | likely_pathogenic | 0.9757 | pathogenic | -3.096 | Highly Destabilizing | 0.98 | D | 0.883 | deleterious | D | 0.629019336 | None | None | N |
V/H | 0.9992 | likely_pathogenic | 0.9995 | pathogenic | -2.932 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
V/I | 0.1216 | likely_benign | 0.1146 | benign | -0.822 | Destabilizing | 0.003 | N | 0.203 | neutral | N | 0.503491572 | None | None | N |
V/K | 0.9976 | likely_pathogenic | 0.9985 | pathogenic | -2.024 | Highly Destabilizing | 0.998 | D | 0.855 | deleterious | None | None | None | None | N |
V/L | 0.8 | likely_pathogenic | 0.8123 | pathogenic | -0.822 | Destabilizing | 0.001 | N | 0.321 | neutral | N | 0.498554616 | None | None | N |
V/M | 0.8773 | likely_pathogenic | 0.8859 | pathogenic | -1.095 | Destabilizing | 0.928 | D | 0.633 | neutral | None | None | None | None | N |
V/N | 0.9941 | likely_pathogenic | 0.9966 | pathogenic | -2.66 | Highly Destabilizing | 0.996 | D | 0.912 | deleterious | None | None | None | None | N |
V/P | 0.9962 | likely_pathogenic | 0.998 | pathogenic | -1.371 | Destabilizing | 0.996 | D | 0.87 | deleterious | None | None | None | None | N |
V/Q | 0.9968 | likely_pathogenic | 0.9978 | pathogenic | -2.326 | Highly Destabilizing | 0.999 | D | 0.893 | deleterious | None | None | None | None | N |
V/R | 0.9953 | likely_pathogenic | 0.9968 | pathogenic | -2.048 | Highly Destabilizing | 0.999 | D | 0.911 | deleterious | None | None | None | None | N |
V/S | 0.9829 | likely_pathogenic | 0.9895 | pathogenic | -3.153 | Highly Destabilizing | 0.998 | D | 0.827 | deleterious | None | None | None | None | N |
V/T | 0.9521 | likely_pathogenic | 0.9693 | pathogenic | -2.702 | Highly Destabilizing | 0.972 | D | 0.599 | neutral | None | None | None | None | N |
V/W | 0.9994 | likely_pathogenic | 0.9994 | pathogenic | -1.959 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
V/Y | 0.9966 | likely_pathogenic | 0.9967 | pathogenic | -1.681 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.