Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33772 | 101539;101540;101541 | chr2:178535301;178535300;178535299 | chr2:179400028;179400027;179400026 |
N2AB | 32131 | 96616;96617;96618 | chr2:178535301;178535300;178535299 | chr2:179400028;179400027;179400026 |
N2A | 31204 | 93835;93836;93837 | chr2:178535301;178535300;178535299 | chr2:179400028;179400027;179400026 |
N2B | 24707 | 74344;74345;74346 | chr2:178535301;178535300;178535299 | chr2:179400028;179400027;179400026 |
Novex-1 | 24832 | 74719;74720;74721 | chr2:178535301;178535300;178535299 | chr2:179400028;179400027;179400026 |
Novex-2 | 24899 | 74920;74921;74922 | chr2:178535301;178535300;178535299 | chr2:179400028;179400027;179400026 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1362410602 | None | 0.028 | N | 0.409 | 0.151 | 0.193865811164 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/E | rs1362410602 | None | 0.028 | N | 0.409 | 0.151 | 0.193865811164 | gnomAD-4.0.0 | 2.56176E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.39262E-06 | 1.33994E-05 | 0 |
K/N | rs1255240121 | None | 0.315 | N | 0.459 | 0.107 | 0.156986980423 | gnomAD-4.0.0 | 3.18225E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.54508E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2445 | likely_benign | 0.2464 | benign | 0.053 | Stabilizing | 0.112 | N | 0.397 | neutral | None | None | None | None | N |
K/C | 0.7453 | likely_pathogenic | 0.7508 | pathogenic | -0.228 | Destabilizing | 0.98 | D | 0.449 | neutral | None | None | None | None | N |
K/D | 0.458 | ambiguous | 0.4802 | ambiguous | -0.024 | Destabilizing | 0.379 | N | 0.519 | neutral | None | None | None | None | N |
K/E | 0.1555 | likely_benign | 0.146 | benign | -0.011 | Destabilizing | 0.028 | N | 0.409 | neutral | N | 0.355516697 | None | None | N |
K/F | 0.7546 | likely_pathogenic | 0.787 | pathogenic | -0.138 | Destabilizing | 0.633 | D | 0.473 | neutral | None | None | None | None | N |
K/G | 0.3436 | ambiguous | 0.4065 | ambiguous | -0.144 | Destabilizing | 0.001 | N | 0.224 | neutral | None | None | None | None | N |
K/H | 0.3819 | ambiguous | 0.3766 | ambiguous | -0.35 | Destabilizing | 0.47 | N | 0.509 | neutral | None | None | None | None | N |
K/I | 0.3499 | ambiguous | 0.3676 | ambiguous | 0.495 | Stabilizing | 0.009 | N | 0.565 | neutral | None | None | None | None | N |
K/L | 0.2964 | likely_benign | 0.298 | benign | 0.495 | Stabilizing | 0.004 | N | 0.498 | neutral | None | None | None | None | N |
K/M | 0.2601 | likely_benign | 0.2619 | benign | 0.142 | Stabilizing | 0.281 | N | 0.507 | neutral | N | 0.484734374 | None | None | N |
K/N | 0.3247 | likely_benign | 0.3564 | ambiguous | 0.182 | Stabilizing | 0.315 | N | 0.459 | neutral | N | 0.469303562 | None | None | N |
K/P | 0.4148 | ambiguous | 0.4295 | ambiguous | 0.375 | Stabilizing | 0.002 | N | 0.243 | neutral | None | None | None | None | N |
K/Q | 0.1322 | likely_benign | 0.125 | benign | 0.051 | Stabilizing | 0.001 | N | 0.143 | neutral | N | 0.417970665 | None | None | N |
K/R | 0.1031 | likely_benign | 0.0982 | benign | -0.043 | Destabilizing | 0.041 | N | 0.488 | neutral | N | 0.433324119 | None | None | N |
K/S | 0.3158 | likely_benign | 0.3324 | benign | -0.248 | Destabilizing | 0.023 | N | 0.186 | neutral | None | None | None | None | N |
K/T | 0.1855 | likely_benign | 0.1816 | benign | -0.089 | Destabilizing | 0.065 | N | 0.481 | neutral | N | 0.454584826 | None | None | N |
K/V | 0.3062 | likely_benign | 0.3096 | benign | 0.375 | Stabilizing | None | N | 0.333 | neutral | None | None | None | None | N |
K/W | 0.8436 | likely_pathogenic | 0.8585 | pathogenic | -0.197 | Destabilizing | 0.987 | D | 0.491 | neutral | None | None | None | None | N |
K/Y | 0.6515 | likely_pathogenic | 0.6945 | pathogenic | 0.157 | Stabilizing | 0.168 | N | 0.486 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.