Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33773 | 101542;101543;101544 | chr2:178535298;178535297;178535296 | chr2:179400025;179400024;179400023 |
N2AB | 32132 | 96619;96620;96621 | chr2:178535298;178535297;178535296 | chr2:179400025;179400024;179400023 |
N2A | 31205 | 93838;93839;93840 | chr2:178535298;178535297;178535296 | chr2:179400025;179400024;179400023 |
N2B | 24708 | 74347;74348;74349 | chr2:178535298;178535297;178535296 | chr2:179400025;179400024;179400023 |
Novex-1 | 24833 | 74722;74723;74724 | chr2:178535298;178535297;178535296 | chr2:179400025;179400024;179400023 |
Novex-2 | 24900 | 74923;74924;74925 | chr2:178535298;178535297;178535296 | chr2:179400025;179400024;179400023 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs768248494 | -1.002 | 0.979 | N | 0.714 | 0.38 | 0.313818047136 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.86E-06 | 0 |
P/S | rs768248494 | -1.002 | 0.979 | N | 0.714 | 0.38 | 0.313818047136 | gnomAD-4.0.0 | 1.59118E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85788E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2313 | likely_benign | 0.2314 | benign | -1.528 | Destabilizing | 0.023 | N | 0.469 | neutral | N | 0.487545072 | None | None | N |
P/C | 0.941 | likely_pathogenic | 0.9459 | pathogenic | -0.965 | Destabilizing | 0.996 | D | 0.865 | deleterious | None | None | None | None | N |
P/D | 0.9679 | likely_pathogenic | 0.9757 | pathogenic | -1.339 | Destabilizing | 0.946 | D | 0.796 | deleterious | None | None | None | None | N |
P/E | 0.8996 | likely_pathogenic | 0.9151 | pathogenic | -1.38 | Destabilizing | 0.932 | D | 0.77 | deleterious | None | None | None | None | N |
P/F | 0.9639 | likely_pathogenic | 0.9564 | pathogenic | -1.332 | Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
P/G | 0.8717 | likely_pathogenic | 0.9017 | pathogenic | -1.799 | Destabilizing | 0.926 | D | 0.731 | prob.delet. | None | None | None | None | N |
P/H | 0.8576 | likely_pathogenic | 0.8549 | pathogenic | -1.289 | Destabilizing | 1.0 | D | 0.843 | deleterious | N | 0.5217558 | None | None | N |
P/I | 0.8907 | likely_pathogenic | 0.8982 | pathogenic | -0.898 | Destabilizing | 0.998 | D | 0.849 | deleterious | None | None | None | None | N |
P/K | 0.9516 | likely_pathogenic | 0.9633 | pathogenic | -1.188 | Destabilizing | 0.998 | D | 0.79 | deleterious | None | None | None | None | N |
P/L | 0.7656 | likely_pathogenic | 0.764 | pathogenic | -0.898 | Destabilizing | 0.997 | D | 0.771 | deleterious | N | 0.519727884 | None | None | N |
P/M | 0.9231 | likely_pathogenic | 0.9266 | pathogenic | -0.622 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
P/N | 0.9519 | likely_pathogenic | 0.9633 | pathogenic | -0.903 | Destabilizing | 0.991 | D | 0.841 | deleterious | None | None | None | None | N |
P/Q | 0.8223 | likely_pathogenic | 0.8443 | pathogenic | -1.159 | Destabilizing | 0.997 | D | 0.828 | deleterious | None | None | None | None | N |
P/R | 0.8896 | likely_pathogenic | 0.9072 | pathogenic | -0.595 | Destabilizing | 0.999 | D | 0.841 | deleterious | N | 0.506271665 | None | None | N |
P/S | 0.6618 | likely_pathogenic | 0.6903 | pathogenic | -1.393 | Destabilizing | 0.979 | D | 0.714 | prob.delet. | N | 0.494243796 | None | None | N |
P/T | 0.673 | likely_pathogenic | 0.7112 | pathogenic | -1.336 | Destabilizing | 0.976 | D | 0.721 | prob.delet. | D | 0.525514782 | None | None | N |
P/V | 0.7715 | likely_pathogenic | 0.7866 | pathogenic | -1.074 | Destabilizing | 0.975 | D | 0.733 | prob.delet. | None | None | None | None | N |
P/W | 0.9855 | likely_pathogenic | 0.9835 | pathogenic | -1.438 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
P/Y | 0.951 | likely_pathogenic | 0.9427 | pathogenic | -1.182 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.