Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33778 | 101557;101558;101559 | chr2:178535283;178535282;178535281 | chr2:179400010;179400009;179400008 |
N2AB | 32137 | 96634;96635;96636 | chr2:178535283;178535282;178535281 | chr2:179400010;179400009;179400008 |
N2A | 31210 | 93853;93854;93855 | chr2:178535283;178535282;178535281 | chr2:179400010;179400009;179400008 |
N2B | 24713 | 74362;74363;74364 | chr2:178535283;178535282;178535281 | chr2:179400010;179400009;179400008 |
Novex-1 | 24838 | 74737;74738;74739 | chr2:178535283;178535282;178535281 | chr2:179400010;179400009;179400008 |
Novex-2 | 24905 | 74938;74939;74940 | chr2:178535283;178535282;178535281 | chr2:179400010;179400009;179400008 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.345 | N | 0.558 | 0.209 | 0.325263233342 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1263 | likely_benign | 0.1319 | benign | -0.201 | Destabilizing | 0.056 | N | 0.499 | neutral | N | 0.506016511 | None | None | N |
E/C | 0.8276 | likely_pathogenic | 0.8477 | pathogenic | -0.096 | Destabilizing | 0.969 | D | 0.724 | deleterious | None | None | None | None | N |
E/D | 0.0931 | likely_benign | 0.1049 | benign | -0.301 | Destabilizing | None | N | 0.174 | neutral | N | 0.48687339 | None | None | N |
E/F | 0.7162 | likely_pathogenic | 0.7437 | pathogenic | -0.189 | Destabilizing | 0.938 | D | 0.669 | prob.neutral | None | None | None | None | N |
E/G | 0.1436 | likely_benign | 0.1289 | benign | -0.34 | Destabilizing | 0.001 | N | 0.512 | neutral | N | 0.507344662 | None | None | N |
E/H | 0.5296 | ambiguous | 0.5686 | pathogenic | 0.291 | Stabilizing | 0.915 | D | 0.555 | neutral | None | None | None | None | N |
E/I | 0.3038 | likely_benign | 0.3472 | ambiguous | 0.115 | Stabilizing | 0.699 | D | 0.685 | prob.delet. | None | None | None | None | N |
E/K | 0.1634 | likely_benign | 0.178 | benign | 0.421 | Stabilizing | 0.345 | N | 0.558 | neutral | N | 0.509864892 | None | None | N |
E/L | 0.3183 | likely_benign | 0.3335 | benign | 0.115 | Stabilizing | 0.699 | D | 0.57 | neutral | None | None | None | None | N |
E/M | 0.4306 | ambiguous | 0.4636 | ambiguous | 0.051 | Stabilizing | 0.827 | D | 0.707 | prob.delet. | None | None | None | None | N |
E/N | 0.2193 | likely_benign | 0.2609 | benign | 0.137 | Stabilizing | 0.071 | N | 0.534 | neutral | None | None | None | None | N |
E/P | 0.3479 | ambiguous | 0.3447 | ambiguous | 0.028 | Stabilizing | 0.257 | N | 0.594 | neutral | None | None | None | None | N |
E/Q | 0.1612 | likely_benign | 0.1731 | benign | 0.152 | Stabilizing | 0.433 | N | 0.618 | neutral | N | 0.509864892 | None | None | N |
E/R | 0.3225 | likely_benign | 0.3401 | ambiguous | 0.634 | Stabilizing | 0.832 | D | 0.58 | neutral | None | None | None | None | N |
E/S | 0.1654 | likely_benign | 0.18 | benign | -0.001 | Destabilizing | 0.274 | N | 0.479 | neutral | None | None | None | None | N |
E/T | 0.1967 | likely_benign | 0.2237 | benign | 0.119 | Stabilizing | 0.343 | N | 0.572 | neutral | None | None | None | None | N |
E/V | 0.1858 | likely_benign | 0.2138 | benign | 0.028 | Stabilizing | 0.555 | D | 0.577 | neutral | D | 0.526775785 | None | None | N |
E/W | 0.9209 | likely_pathogenic | 0.9336 | pathogenic | -0.095 | Destabilizing | 0.993 | D | 0.744 | deleterious | None | None | None | None | N |
E/Y | 0.6331 | likely_pathogenic | 0.6669 | pathogenic | 0.044 | Stabilizing | 0.976 | D | 0.699 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.