Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33781 | 101566;101567;101568 | chr2:178535274;178535273;178535272 | chr2:179400001;179400000;179399999 |
N2AB | 32140 | 96643;96644;96645 | chr2:178535274;178535273;178535272 | chr2:179400001;179400000;179399999 |
N2A | 31213 | 93862;93863;93864 | chr2:178535274;178535273;178535272 | chr2:179400001;179400000;179399999 |
N2B | 24716 | 74371;74372;74373 | chr2:178535274;178535273;178535272 | chr2:179400001;179400000;179399999 |
Novex-1 | 24841 | 74746;74747;74748 | chr2:178535274;178535273;178535272 | chr2:179400001;179400000;179399999 |
Novex-2 | 24908 | 74947;74948;74949 | chr2:178535274;178535273;178535272 | chr2:179400001;179400000;179399999 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1029128193 | None | None | N | 0.074 | 0.137 | 0.141422826196 | gnomAD-4.0.0 | 4.77324E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57334E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.281 | likely_benign | 0.2645 | benign | -0.834 | Destabilizing | 0.005 | N | 0.378 | neutral | None | None | None | None | N |
I/C | 0.6573 | likely_pathogenic | 0.6346 | pathogenic | -0.642 | Destabilizing | 0.283 | N | 0.489 | neutral | None | None | None | None | N |
I/D | 0.6714 | likely_pathogenic | 0.6354 | pathogenic | 0.086 | Stabilizing | 0.101 | N | 0.609 | neutral | None | None | None | None | N |
I/E | 0.4676 | ambiguous | 0.4552 | ambiguous | 0.017 | Stabilizing | 0.077 | N | 0.574 | neutral | None | None | None | None | N |
I/F | 0.1969 | likely_benign | 0.1775 | benign | -0.757 | Destabilizing | 0.022 | N | 0.423 | neutral | None | None | None | None | N |
I/G | 0.6266 | likely_pathogenic | 0.5743 | pathogenic | -1.035 | Destabilizing | 0.101 | N | 0.558 | neutral | None | None | None | None | N |
I/H | 0.5158 | ambiguous | 0.5021 | ambiguous | -0.358 | Destabilizing | 0.653 | D | 0.515 | neutral | None | None | None | None | N |
I/K | 0.3458 | ambiguous | 0.342 | ambiguous | -0.306 | Destabilizing | 0.002 | N | 0.603 | neutral | N | 0.422515267 | None | None | N |
I/L | 0.1362 | likely_benign | 0.1084 | benign | -0.416 | Destabilizing | None | N | 0.279 | neutral | N | 0.421475117 | None | None | N |
I/M | 0.1074 | likely_benign | 0.099 | benign | -0.311 | Destabilizing | 0.017 | N | 0.501 | neutral | N | 0.404276223 | None | None | N |
I/N | 0.2654 | likely_benign | 0.2569 | benign | -0.091 | Destabilizing | 0.283 | N | 0.612 | neutral | None | None | None | None | N |
I/P | 0.7644 | likely_pathogenic | 0.6979 | pathogenic | -0.521 | Destabilizing | 0.546 | D | 0.614 | neutral | None | None | None | None | N |
I/Q | 0.3801 | ambiguous | 0.368 | ambiguous | -0.305 | Destabilizing | 0.333 | N | 0.579 | neutral | None | None | None | None | N |
I/R | 0.2981 | likely_benign | 0.2881 | benign | 0.183 | Stabilizing | 0.106 | N | 0.611 | neutral | N | 0.422515267 | None | None | N |
I/S | 0.2706 | likely_benign | 0.2722 | benign | -0.675 | Destabilizing | 0.011 | N | 0.429 | neutral | None | None | None | None | N |
I/T | 0.1363 | likely_benign | 0.1529 | benign | -0.632 | Destabilizing | None | N | 0.189 | neutral | N | 0.396128381 | None | None | N |
I/V | 0.057 | likely_benign | 0.0564 | benign | -0.521 | Destabilizing | None | N | 0.074 | neutral | N | 0.421475117 | None | None | N |
I/W | 0.8079 | likely_pathogenic | 0.7801 | pathogenic | -0.76 | Destabilizing | 0.871 | D | 0.577 | neutral | None | None | None | None | N |
I/Y | 0.5301 | ambiguous | 0.5012 | ambiguous | -0.493 | Destabilizing | 0.018 | N | 0.605 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.