Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33784 | 101575;101576;101577 | chr2:178535265;178535264;178535263 | chr2:179399992;179399991;179399990 |
N2AB | 32143 | 96652;96653;96654 | chr2:178535265;178535264;178535263 | chr2:179399992;179399991;179399990 |
N2A | 31216 | 93871;93872;93873 | chr2:178535265;178535264;178535263 | chr2:179399992;179399991;179399990 |
N2B | 24719 | 74380;74381;74382 | chr2:178535265;178535264;178535263 | chr2:179399992;179399991;179399990 |
Novex-1 | 24844 | 74755;74756;74757 | chr2:178535265;178535264;178535263 | chr2:179399992;179399991;179399990 |
Novex-2 | 24911 | 74956;74957;74958 | chr2:178535265;178535264;178535263 | chr2:179399992;179399991;179399990 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs918368881 | 0.412 | 0.996 | N | 0.602 | 0.25 | 0.292062946507 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 0 | 1.17924E-03 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs918368881 | 0.412 | 0.996 | N | 0.602 | 0.25 | 0.292062946507 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 1.31027E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs918368881 | 0.412 | 0.996 | N | 0.602 | 0.25 | 0.292062946507 | gnomAD-4.0.0 | 1.31453E-05 | None | None | None | None | N | None | 0 | 1.31027E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5001 | ambiguous | 0.4507 | ambiguous | -0.025 | Destabilizing | 0.983 | D | 0.627 | neutral | N | 0.451798024 | None | None | N |
E/C | 0.986 | likely_pathogenic | 0.9857 | pathogenic | -0.168 | Destabilizing | 0.999 | D | 0.744 | deleterious | None | None | None | None | N |
E/D | 0.3814 | ambiguous | 0.3758 | ambiguous | -0.229 | Destabilizing | 0.88 | D | 0.538 | neutral | N | 0.451798024 | None | None | N |
E/F | 0.9718 | likely_pathogenic | 0.9675 | pathogenic | -0.078 | Destabilizing | 0.999 | D | 0.657 | prob.neutral | None | None | None | None | N |
E/G | 0.5472 | ambiguous | 0.5047 | ambiguous | -0.14 | Destabilizing | 0.998 | D | 0.547 | neutral | N | 0.452838174 | None | None | N |
E/H | 0.9516 | likely_pathogenic | 0.9466 | pathogenic | 0.51 | Stabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/I | 0.8434 | likely_pathogenic | 0.8132 | pathogenic | 0.22 | Stabilizing | 0.996 | D | 0.663 | prob.neutral | None | None | None | None | N |
E/K | 0.7533 | likely_pathogenic | 0.6713 | pathogenic | 0.396 | Stabilizing | 0.991 | D | 0.627 | neutral | N | 0.45318489 | None | None | N |
E/L | 0.8859 | likely_pathogenic | 0.8584 | pathogenic | 0.22 | Stabilizing | 0.996 | D | 0.601 | neutral | None | None | None | None | N |
E/M | 0.8954 | likely_pathogenic | 0.8743 | pathogenic | 0.003 | Stabilizing | 0.994 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/N | 0.8129 | likely_pathogenic | 0.7929 | pathogenic | 0.221 | Stabilizing | 0.991 | D | 0.685 | prob.delet. | None | None | None | None | N |
E/P | 0.8658 | likely_pathogenic | 0.838 | pathogenic | 0.156 | Stabilizing | 0.971 | D | 0.705 | prob.delet. | None | None | None | None | N |
E/Q | 0.6249 | likely_pathogenic | 0.5785 | pathogenic | 0.224 | Stabilizing | 0.996 | D | 0.602 | neutral | N | 0.453358249 | None | None | N |
E/R | 0.841 | likely_pathogenic | 0.8002 | pathogenic | 0.627 | Stabilizing | 0.998 | D | 0.69 | prob.delet. | None | None | None | None | N |
E/S | 0.707 | likely_pathogenic | 0.6746 | pathogenic | 0.054 | Stabilizing | 0.987 | D | 0.664 | prob.neutral | None | None | None | None | N |
E/T | 0.7165 | likely_pathogenic | 0.681 | pathogenic | 0.153 | Stabilizing | 0.997 | D | 0.696 | prob.delet. | None | None | None | None | N |
E/V | 0.6736 | likely_pathogenic | 0.6244 | pathogenic | 0.156 | Stabilizing | 0.992 | D | 0.611 | neutral | N | 0.452664815 | None | None | N |
E/W | 0.9906 | likely_pathogenic | 0.9888 | pathogenic | -0.035 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
E/Y | 0.9468 | likely_pathogenic | 0.9414 | pathogenic | 0.146 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.