Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3384 | 10375;10376;10377 | chr2:178759137;178759136;178759135 | chr2:179623864;179623863;179623862 |
N2AB | 3384 | 10375;10376;10377 | chr2:178759137;178759136;178759135 | chr2:179623864;179623863;179623862 |
N2A | 3384 | 10375;10376;10377 | chr2:178759137;178759136;178759135 | chr2:179623864;179623863;179623862 |
N2B | 3338 | 10237;10238;10239 | chr2:178759137;178759136;178759135 | chr2:179623864;179623863;179623862 |
Novex-1 | 3338 | 10237;10238;10239 | chr2:178759137;178759136;178759135 | chr2:179623864;179623863;179623862 |
Novex-2 | 3338 | 10237;10238;10239 | chr2:178759137;178759136;178759135 | chr2:179623864;179623863;179623862 |
Novex-3 | 3384 | 10375;10376;10377 | chr2:178759137;178759136;178759135 | chr2:179623864;179623863;179623862 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 1.0 | D | 0.732 | 0.498 | 0.386234084001 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
I/S | None | None | 1.0 | D | 0.749 | 0.716 | 0.899799008202 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9425 | likely_pathogenic | 0.9569 | pathogenic | -2.104 | Highly Destabilizing | 0.999 | D | 0.517 | neutral | None | None | None | None | N |
I/C | 0.9776 | likely_pathogenic | 0.9821 | pathogenic | -1.157 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
I/D | 0.9952 | likely_pathogenic | 0.9964 | pathogenic | -2.616 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
I/E | 0.9775 | likely_pathogenic | 0.9831 | pathogenic | -2.357 | Highly Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
I/F | 0.6273 | likely_pathogenic | 0.7057 | pathogenic | -1.334 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | D | 0.645036204 | None | None | N |
I/G | 0.9851 | likely_pathogenic | 0.9869 | pathogenic | -2.634 | Highly Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
I/H | 0.9803 | likely_pathogenic | 0.9862 | pathogenic | -2.223 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
I/K | 0.9586 | likely_pathogenic | 0.9685 | pathogenic | -1.538 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
I/L | 0.2213 | likely_benign | 0.2752 | benign | -0.559 | Destabilizing | 0.993 | D | 0.421 | neutral | N | 0.488852044 | None | None | N |
I/M | 0.2199 | likely_benign | 0.2458 | benign | -0.439 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | D | 0.579719839 | None | None | N |
I/N | 0.9316 | likely_pathogenic | 0.9454 | pathogenic | -2.011 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | D | 0.662598185 | None | None | N |
I/P | 0.9873 | likely_pathogenic | 0.9871 | pathogenic | -1.058 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
I/Q | 0.9559 | likely_pathogenic | 0.969 | pathogenic | -1.802 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
I/R | 0.9372 | likely_pathogenic | 0.9519 | pathogenic | -1.477 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
I/S | 0.9586 | likely_pathogenic | 0.9671 | pathogenic | -2.606 | Highly Destabilizing | 1.0 | D | 0.749 | deleterious | D | 0.661719911 | None | None | N |
I/T | 0.9443 | likely_pathogenic | 0.964 | pathogenic | -2.196 | Highly Destabilizing | 1.0 | D | 0.695 | prob.neutral | D | 0.656463123 | None | None | N |
I/V | 0.2319 | likely_benign | 0.2838 | benign | -1.058 | Destabilizing | 0.993 | D | 0.411 | neutral | N | 0.507049618 | None | None | N |
I/W | 0.9781 | likely_pathogenic | 0.9805 | pathogenic | -1.764 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
I/Y | 0.9304 | likely_pathogenic | 0.9423 | pathogenic | -1.379 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.