Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3394 | 10405;10406;10407 | chr2:178759107;178759106;178759105 | chr2:179623834;179623833;179623832 |
N2AB | 3394 | 10405;10406;10407 | chr2:178759107;178759106;178759105 | chr2:179623834;179623833;179623832 |
N2A | 3394 | 10405;10406;10407 | chr2:178759107;178759106;178759105 | chr2:179623834;179623833;179623832 |
N2B | 3348 | 10267;10268;10269 | chr2:178759107;178759106;178759105 | chr2:179623834;179623833;179623832 |
Novex-1 | 3348 | 10267;10268;10269 | chr2:178759107;178759106;178759105 | chr2:179623834;179623833;179623832 |
Novex-2 | 3348 | 10267;10268;10269 | chr2:178759107;178759106;178759105 | chr2:179623834;179623833;179623832 |
Novex-3 | 3394 | 10405;10406;10407 | chr2:178759107;178759106;178759105 | chr2:179623834;179623833;179623832 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | None | None | 0.99 | N | 0.641 | 0.467 | 0.281780670237 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2631 | likely_benign | 0.2881 | benign | -0.6 | Destabilizing | 0.993 | D | 0.61 | neutral | None | None | None | None | I |
Q/C | 0.7699 | likely_pathogenic | 0.7676 | pathogenic | 0.006 | Stabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | I |
Q/D | 0.6074 | likely_pathogenic | 0.6466 | pathogenic | 0.149 | Stabilizing | 0.971 | D | 0.611 | neutral | None | None | None | None | I |
Q/E | 0.1171 | likely_benign | 0.1296 | benign | 0.199 | Stabilizing | 0.953 | D | 0.525 | neutral | N | 0.498591116 | None | None | I |
Q/F | 0.8286 | likely_pathogenic | 0.848 | pathogenic | -0.551 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | I |
Q/G | 0.4646 | ambiguous | 0.4931 | ambiguous | -0.877 | Destabilizing | 0.985 | D | 0.659 | neutral | None | None | None | None | I |
Q/H | 0.3085 | likely_benign | 0.3276 | benign | -0.63 | Destabilizing | 0.997 | D | 0.62 | neutral | N | 0.511373087 | None | None | I |
Q/I | 0.5458 | ambiguous | 0.5677 | pathogenic | 0.073 | Stabilizing | 0.999 | D | 0.696 | prob.neutral | None | None | None | None | I |
Q/K | 0.1446 | likely_benign | 0.1701 | benign | -0.061 | Destabilizing | 0.98 | D | 0.602 | neutral | N | 0.505489797 | None | None | I |
Q/L | 0.2527 | likely_benign | 0.268 | benign | 0.073 | Stabilizing | 0.99 | D | 0.642 | neutral | N | 0.509622063 | None | None | I |
Q/M | 0.5373 | ambiguous | 0.5323 | ambiguous | 0.335 | Stabilizing | 0.999 | D | 0.617 | neutral | None | None | None | None | I |
Q/N | 0.432 | ambiguous | 0.4519 | ambiguous | -0.578 | Destabilizing | 0.469 | N | 0.333 | neutral | None | None | None | None | I |
Q/P | 0.2917 | likely_benign | 0.374 | ambiguous | -0.121 | Destabilizing | 0.999 | D | 0.628 | neutral | N | 0.500899893 | None | None | I |
Q/R | 0.1292 | likely_benign | 0.147 | benign | 0.021 | Stabilizing | 0.99 | D | 0.641 | neutral | N | 0.510152989 | None | None | I |
Q/S | 0.3046 | likely_benign | 0.3383 | benign | -0.659 | Destabilizing | 0.985 | D | 0.59 | neutral | None | None | None | None | I |
Q/T | 0.2809 | likely_benign | 0.303 | benign | -0.416 | Destabilizing | 0.985 | D | 0.625 | neutral | None | None | None | None | I |
Q/V | 0.3623 | ambiguous | 0.3795 | ambiguous | -0.121 | Destabilizing | 0.999 | D | 0.643 | neutral | None | None | None | None | I |
Q/W | 0.7425 | likely_pathogenic | 0.7567 | pathogenic | -0.437 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | I |
Q/Y | 0.613 | likely_pathogenic | 0.6536 | pathogenic | -0.215 | Destabilizing | 0.999 | D | 0.611 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.