Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3395 | 10408;10409;10410 | chr2:178759104;178759103;178759102 | chr2:179623831;179623830;179623829 |
N2AB | 3395 | 10408;10409;10410 | chr2:178759104;178759103;178759102 | chr2:179623831;179623830;179623829 |
N2A | 3395 | 10408;10409;10410 | chr2:178759104;178759103;178759102 | chr2:179623831;179623830;179623829 |
N2B | 3349 | 10270;10271;10272 | chr2:178759104;178759103;178759102 | chr2:179623831;179623830;179623829 |
Novex-1 | 3349 | 10270;10271;10272 | chr2:178759104;178759103;178759102 | chr2:179623831;179623830;179623829 |
Novex-2 | 3349 | 10270;10271;10272 | chr2:178759104;178759103;178759102 | chr2:179623831;179623830;179623829 |
Novex-3 | 3395 | 10408;10409;10410 | chr2:178759104;178759103;178759102 | chr2:179623831;179623830;179623829 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | None | None | 1.0 | N | 0.623 | 0.628 | 0.788010845958 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.5835 | likely_pathogenic | 0.6853 | pathogenic | -0.641 | Destabilizing | 1.0 | D | 0.535 | neutral | None | None | None | None | I |
F/C | 0.7211 | likely_pathogenic | 0.7148 | pathogenic | -0.284 | Destabilizing | 1.0 | D | 0.661 | neutral | D | 0.579444078 | None | None | I |
F/D | 0.7622 | likely_pathogenic | 0.8011 | pathogenic | 0.797 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | I |
F/E | 0.7756 | likely_pathogenic | 0.8393 | pathogenic | 0.756 | Stabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | I |
F/G | 0.8162 | likely_pathogenic | 0.8616 | pathogenic | -0.782 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | I |
F/H | 0.6632 | likely_pathogenic | 0.7052 | pathogenic | 0.323 | Stabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | I |
F/I | 0.3919 | ambiguous | 0.4492 | ambiguous | -0.313 | Destabilizing | 1.0 | D | 0.632 | neutral | N | 0.507134781 | None | None | I |
F/K | 0.8457 | likely_pathogenic | 0.8958 | pathogenic | 0.046 | Stabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | I |
F/L | 0.8954 | likely_pathogenic | 0.9227 | pathogenic | -0.313 | Destabilizing | 0.999 | D | 0.528 | neutral | N | 0.480530439 | None | None | I |
F/M | 0.6231 | likely_pathogenic | 0.6603 | pathogenic | -0.324 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
F/N | 0.6655 | likely_pathogenic | 0.7073 | pathogenic | 0.062 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
F/P | 0.9905 | likely_pathogenic | 0.9927 | pathogenic | -0.403 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | I |
F/Q | 0.7718 | likely_pathogenic | 0.8295 | pathogenic | 0.035 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | I |
F/R | 0.7689 | likely_pathogenic | 0.8178 | pathogenic | 0.386 | Stabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | I |
F/S | 0.4594 | ambiguous | 0.5532 | ambiguous | -0.528 | Destabilizing | 1.0 | D | 0.623 | neutral | N | 0.486340762 | None | None | I |
F/T | 0.5288 | ambiguous | 0.6229 | pathogenic | -0.48 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | I |
F/V | 0.369 | ambiguous | 0.4356 | ambiguous | -0.403 | Destabilizing | 1.0 | D | 0.587 | neutral | N | 0.502981042 | None | None | I |
F/W | 0.5669 | likely_pathogenic | 0.5601 | ambiguous | -0.343 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | I |
F/Y | 0.2264 | likely_benign | 0.218 | benign | -0.261 | Destabilizing | 0.999 | D | 0.512 | neutral | N | 0.490115808 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.