Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34037 | 102334;102335;102336 | chr2:178534506;178534505;178534504 | chr2:179399233;179399232;179399231 |
N2AB | 32396 | 97411;97412;97413 | chr2:178534506;178534505;178534504 | chr2:179399233;179399232;179399231 |
N2A | 31469 | 94630;94631;94632 | chr2:178534506;178534505;178534504 | chr2:179399233;179399232;179399231 |
N2B | 24972 | 75139;75140;75141 | chr2:178534506;178534505;178534504 | chr2:179399233;179399232;179399231 |
Novex-1 | 25097 | 75514;75515;75516 | chr2:178534506;178534505;178534504 | chr2:179399233;179399232;179399231 |
Novex-2 | 25164 | 75715;75716;75717 | chr2:178534506;178534505;178534504 | chr2:179399233;179399232;179399231 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | None | N | None | 0.466 | 0.487419150623 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2196 | likely_benign | 0.1982 | benign | -0.164 | Destabilizing | None | None | None | None | N | 0.475163247 | None | None | I |
E/C | 0.9444 | likely_pathogenic | 0.9406 | pathogenic | -0.06 | Destabilizing | None | None | None | None | None | None | None | None | I |
E/D | 0.1649 | likely_benign | 0.165 | benign | -0.16 | Destabilizing | None | None | None | None | N | 0.455577408 | None | None | I |
E/F | 0.8896 | likely_pathogenic | 0.8606 | pathogenic | -0.17 | Destabilizing | None | None | None | None | None | None | None | None | I |
E/G | 0.3118 | likely_benign | 0.2956 | benign | -0.316 | Destabilizing | None | None | None | None | N | 0.496578669 | None | None | I |
E/H | 0.6787 | likely_pathogenic | 0.6552 | pathogenic | 0.259 | Stabilizing | None | None | None | None | None | None | None | None | I |
E/I | 0.5799 | likely_pathogenic | 0.5459 | ambiguous | 0.188 | Stabilizing | None | None | None | None | None | None | None | None | I |
E/K | 0.2875 | likely_benign | 0.2432 | benign | 0.359 | Stabilizing | None | None | None | None | N | 0.431719114 | None | None | I |
E/L | 0.6373 | likely_pathogenic | 0.5833 | pathogenic | 0.188 | Stabilizing | None | None | None | None | None | None | None | None | I |
E/M | 0.6777 | likely_pathogenic | 0.6482 | pathogenic | 0.107 | Stabilizing | None | None | None | None | None | None | None | None | I |
E/N | 0.3824 | ambiguous | 0.3748 | ambiguous | 0.19 | Stabilizing | None | None | None | None | None | None | None | None | I |
E/P | 0.6807 | likely_pathogenic | 0.6688 | pathogenic | 0.09 | Stabilizing | None | None | None | None | None | None | None | None | I |
E/Q | 0.299 | likely_benign | 0.2869 | benign | 0.208 | Stabilizing | None | None | None | None | N | 0.479742347 | None | None | I |
E/R | 0.4535 | ambiguous | 0.4003 | ambiguous | 0.584 | Stabilizing | None | None | None | None | None | None | None | None | I |
E/S | 0.332 | likely_benign | 0.3186 | benign | 0.001 | Stabilizing | None | None | None | None | None | None | None | None | I |
E/T | 0.3377 | likely_benign | 0.3192 | benign | 0.124 | Stabilizing | None | None | None | None | None | None | None | None | I |
E/V | 0.3749 | ambiguous | 0.3505 | ambiguous | 0.09 | Stabilizing | None | None | None | None | N | 0.484110804 | None | None | I |
E/W | 0.9637 | likely_pathogenic | 0.9553 | pathogenic | -0.094 | Destabilizing | None | None | None | None | None | None | None | None | I |
E/Y | 0.7852 | likely_pathogenic | 0.7491 | pathogenic | 0.057 | Stabilizing | None | None | None | None | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.