Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3413 | 10462;10463;10464 | chr2:178759050;178759049;178759048 | chr2:179623777;179623776;179623775 |
N2AB | 3413 | 10462;10463;10464 | chr2:178759050;178759049;178759048 | chr2:179623777;179623776;179623775 |
N2A | 3413 | 10462;10463;10464 | chr2:178759050;178759049;178759048 | chr2:179623777;179623776;179623775 |
N2B | 3367 | 10324;10325;10326 | chr2:178759050;178759049;178759048 | chr2:179623777;179623776;179623775 |
Novex-1 | 3367 | 10324;10325;10326 | chr2:178759050;178759049;178759048 | chr2:179623777;179623776;179623775 |
Novex-2 | 3367 | 10324;10325;10326 | chr2:178759050;178759049;178759048 | chr2:179623777;179623776;179623775 |
Novex-3 | 3413 | 10462;10463;10464 | chr2:178759050;178759049;178759048 | chr2:179623777;179623776;179623775 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | None | None | 0.266 | D | 0.505 | 0.253 | 0.328752806141 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0764 | likely_benign | 0.0761 | benign | -1.189 | Destabilizing | 0.005 | N | 0.269 | neutral | D | 0.531405233 | None | None | N |
T/C | 0.3566 | ambiguous | 0.3011 | benign | -0.791 | Destabilizing | 0.356 | N | 0.5 | neutral | None | None | None | None | N |
T/D | 0.2477 | likely_benign | 0.2652 | benign | -0.668 | Destabilizing | 0.016 | N | 0.421 | neutral | None | None | None | None | N |
T/E | 0.1867 | likely_benign | 0.1993 | benign | -0.66 | Destabilizing | None | N | 0.203 | neutral | None | None | None | None | N |
T/F | 0.1409 | likely_benign | 0.1331 | benign | -1.444 | Destabilizing | 0.214 | N | 0.594 | neutral | None | None | None | None | N |
T/G | 0.2251 | likely_benign | 0.2254 | benign | -1.419 | Destabilizing | 0.136 | N | 0.461 | neutral | None | None | None | None | N |
T/H | 0.1865 | likely_benign | 0.1795 | benign | -1.726 | Destabilizing | 0.356 | N | 0.537 | neutral | None | None | None | None | N |
T/I | 0.0613 | likely_benign | 0.0518 | benign | -0.657 | Destabilizing | None | N | 0.207 | neutral | N | 0.510952412 | None | None | N |
T/K | 0.1282 | likely_benign | 0.1381 | benign | -0.748 | Destabilizing | 0.016 | N | 0.421 | neutral | None | None | None | None | N |
T/L | 0.0597 | likely_benign | 0.0527 | benign | -0.657 | Destabilizing | 0.002 | N | 0.309 | neutral | None | None | None | None | N |
T/M | 0.0761 | likely_benign | 0.0707 | benign | -0.169 | Destabilizing | 0.214 | N | 0.519 | neutral | None | None | None | None | N |
T/N | 0.0872 | likely_benign | 0.0884 | benign | -0.769 | Destabilizing | 0.106 | N | 0.34 | neutral | N | 0.511607447 | None | None | N |
T/P | 0.1122 | likely_benign | 0.1011 | benign | -0.806 | Destabilizing | 0.266 | N | 0.505 | neutral | D | 0.585233177 | None | None | N |
T/Q | 0.159 | likely_benign | 0.1667 | benign | -1.036 | Destabilizing | 0.003 | N | 0.267 | neutral | None | None | None | None | N |
T/R | 0.1002 | likely_benign | 0.1042 | benign | -0.479 | Destabilizing | 0.072 | N | 0.429 | neutral | None | None | None | None | N |
T/S | 0.0998 | likely_benign | 0.1019 | benign | -1.073 | Destabilizing | 0.024 | N | 0.347 | neutral | N | 0.508140706 | None | None | N |
T/V | 0.0723 | likely_benign | 0.0689 | benign | -0.806 | Destabilizing | None | N | 0.167 | neutral | None | None | None | None | N |
T/W | 0.4616 | ambiguous | 0.4338 | ambiguous | -1.313 | Destabilizing | 0.864 | D | 0.543 | neutral | None | None | None | None | N |
T/Y | 0.226 | likely_benign | 0.2057 | benign | -1.066 | Destabilizing | 0.356 | N | 0.591 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.