Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3414 | 10465;10466;10467 | chr2:178759047;178759046;178759045 | chr2:179623774;179623773;179623772 |
N2AB | 3414 | 10465;10466;10467 | chr2:178759047;178759046;178759045 | chr2:179623774;179623773;179623772 |
N2A | 3414 | 10465;10466;10467 | chr2:178759047;178759046;178759045 | chr2:179623774;179623773;179623772 |
N2B | 3368 | 10327;10328;10329 | chr2:178759047;178759046;178759045 | chr2:179623774;179623773;179623772 |
Novex-1 | 3368 | 10327;10328;10329 | chr2:178759047;178759046;178759045 | chr2:179623774;179623773;179623772 |
Novex-2 | 3368 | 10327;10328;10329 | chr2:178759047;178759046;178759045 | chr2:179623774;179623773;179623772 |
Novex-3 | 3414 | 10465;10466;10467 | chr2:178759047;178759046;178759045 | chr2:179623774;179623773;179623772 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | D | 0.859 | 0.912 | 0.93233676213 | gnomAD-4.0.0 | 1.59076E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02188E-05 |
Y/D | None | None | 1.0 | D | 0.887 | 0.923 | 0.948424836998 | gnomAD-4.0.0 | 1.20036E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31255E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9897 | likely_pathogenic | 0.9903 | pathogenic | -2.2 | Highly Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
Y/C | 0.7868 | likely_pathogenic | 0.8257 | pathogenic | -1.536 | Destabilizing | 1.0 | D | 0.859 | deleterious | D | 0.77922468 | None | None | N |
Y/D | 0.9971 | likely_pathogenic | 0.9974 | pathogenic | -2.736 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | D | 0.779326511 | None | None | N |
Y/E | 0.9987 | likely_pathogenic | 0.9989 | pathogenic | -2.484 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
Y/F | 0.169 | likely_benign | 0.2108 | benign | -0.71 | Destabilizing | 0.999 | D | 0.688 | prob.neutral | D | 0.588526407 | None | None | N |
Y/G | 0.9904 | likely_pathogenic | 0.9911 | pathogenic | -2.66 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
Y/H | 0.9509 | likely_pathogenic | 0.9656 | pathogenic | -2.02 | Highly Destabilizing | 1.0 | D | 0.789 | deleterious | D | 0.779428523 | None | None | N |
Y/I | 0.8815 | likely_pathogenic | 0.8879 | pathogenic | -0.682 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
Y/K | 0.9977 | likely_pathogenic | 0.9982 | pathogenic | -1.637 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
Y/L | 0.8271 | likely_pathogenic | 0.8309 | pathogenic | -0.682 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
Y/M | 0.9615 | likely_pathogenic | 0.9651 | pathogenic | -0.824 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
Y/N | 0.9821 | likely_pathogenic | 0.9829 | pathogenic | -2.526 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | D | 0.77922468 | None | None | N |
Y/P | 0.998 | likely_pathogenic | 0.9977 | pathogenic | -1.204 | Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
Y/Q | 0.9972 | likely_pathogenic | 0.9979 | pathogenic | -2.088 | Highly Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
Y/R | 0.9903 | likely_pathogenic | 0.992 | pathogenic | -1.915 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
Y/S | 0.9785 | likely_pathogenic | 0.9783 | pathogenic | -2.873 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | D | 0.77922468 | None | None | N |
Y/T | 0.9898 | likely_pathogenic | 0.9894 | pathogenic | -2.47 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
Y/V | 0.8015 | likely_pathogenic | 0.8014 | pathogenic | -1.204 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
Y/W | 0.7321 | likely_pathogenic | 0.7291 | pathogenic | -0.064 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.