Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34153 | 102682;102683;102684 | chr2:178534158;178534157;178534156 | chr2:179398885;179398884;179398883 |
N2AB | 32512 | 97759;97760;97761 | chr2:178534158;178534157;178534156 | chr2:179398885;179398884;179398883 |
N2A | 31585 | 94978;94979;94980 | chr2:178534158;178534157;178534156 | chr2:179398885;179398884;179398883 |
N2B | 25088 | 75487;75488;75489 | chr2:178534158;178534157;178534156 | chr2:179398885;179398884;179398883 |
Novex-1 | 25213 | 75862;75863;75864 | chr2:178534158;178534157;178534156 | chr2:179398885;179398884;179398883 |
Novex-2 | 25280 | 76063;76064;76065 | chr2:178534158;178534157;178534156 | chr2:179398885;179398884;179398883 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1236074112 | -0.344 | 0.004 | N | 0.269 | 0.137 | 0.346085882481 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 8.88E-06 | 0 |
V/I | rs1236074112 | -0.344 | 0.004 | N | 0.269 | 0.137 | 0.346085882481 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.06868E-04 | 0 |
V/I | rs1236074112 | -0.344 | 0.004 | N | 0.269 | 0.137 | 0.346085882481 | gnomAD-4.0.0 | 5.1235E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.67982E-05 | 5.68731E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2437 | likely_benign | 0.2222 | benign | -1.501 | Destabilizing | None | N | 0.276 | neutral | N | 0.467734976 | None | None | I |
V/C | 0.817 | likely_pathogenic | 0.8244 | pathogenic | -0.782 | Destabilizing | 0.909 | D | 0.779 | deleterious | None | None | None | None | I |
V/D | 0.9184 | likely_pathogenic | 0.9062 | pathogenic | -1.633 | Destabilizing | 0.497 | N | 0.847 | deleterious | N | 0.494896954 | None | None | I |
V/E | 0.801 | likely_pathogenic | 0.7727 | pathogenic | -1.432 | Destabilizing | 0.567 | D | 0.806 | deleterious | None | None | None | None | I |
V/F | 0.4796 | ambiguous | 0.4651 | ambiguous | -0.815 | Destabilizing | 0.667 | D | 0.833 | deleterious | N | 0.482019711 | None | None | I |
V/G | 0.5347 | ambiguous | 0.4824 | ambiguous | -2.003 | Highly Destabilizing | 0.124 | N | 0.775 | deleterious | N | 0.467891929 | None | None | I |
V/H | 0.9199 | likely_pathogenic | 0.9125 | pathogenic | -1.654 | Destabilizing | 0.968 | D | 0.819 | deleterious | None | None | None | None | I |
V/I | 0.1106 | likely_benign | 0.1158 | benign | -0.127 | Destabilizing | 0.004 | N | 0.269 | neutral | N | 0.50494657 | None | None | I |
V/K | 0.7934 | likely_pathogenic | 0.7585 | pathogenic | -1.113 | Destabilizing | 0.567 | D | 0.802 | deleterious | None | None | None | None | I |
V/L | 0.4146 | ambiguous | 0.4041 | ambiguous | -0.127 | Destabilizing | 0.055 | N | 0.501 | neutral | N | 0.501674192 | None | None | I |
V/M | 0.3275 | likely_benign | 0.3149 | benign | -0.086 | Destabilizing | 0.726 | D | 0.671 | neutral | None | None | None | None | I |
V/N | 0.807 | likely_pathogenic | 0.789 | pathogenic | -1.357 | Destabilizing | 0.726 | D | 0.845 | deleterious | None | None | None | None | I |
V/P | 0.9767 | likely_pathogenic | 0.9656 | pathogenic | -0.556 | Destabilizing | 0.567 | D | 0.819 | deleterious | None | None | None | None | I |
V/Q | 0.7539 | likely_pathogenic | 0.716 | pathogenic | -1.208 | Destabilizing | 0.726 | D | 0.799 | deleterious | None | None | None | None | I |
V/R | 0.7225 | likely_pathogenic | 0.6609 | pathogenic | -1.016 | Destabilizing | 0.567 | D | 0.844 | deleterious | None | None | None | None | I |
V/S | 0.4878 | ambiguous | 0.4651 | ambiguous | -1.985 | Destabilizing | 0.157 | N | 0.747 | deleterious | None | None | None | None | I |
V/T | 0.3318 | likely_benign | 0.3248 | benign | -1.638 | Destabilizing | 0.157 | N | 0.663 | neutral | None | None | None | None | I |
V/W | 0.9708 | likely_pathogenic | 0.9675 | pathogenic | -1.288 | Destabilizing | 0.968 | D | 0.812 | deleterious | None | None | None | None | I |
V/Y | 0.8686 | likely_pathogenic | 0.858 | pathogenic | -0.827 | Destabilizing | 0.726 | D | 0.803 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.