Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34159 | 102700;102701;102702 | chr2:178534140;178534139;178534138 | chr2:179398867;179398866;179398865 |
N2AB | 32518 | 97777;97778;97779 | chr2:178534140;178534139;178534138 | chr2:179398867;179398866;179398865 |
N2A | 31591 | 94996;94997;94998 | chr2:178534140;178534139;178534138 | chr2:179398867;179398866;179398865 |
N2B | 25094 | 75505;75506;75507 | chr2:178534140;178534139;178534138 | chr2:179398867;179398866;179398865 |
Novex-1 | 25219 | 75880;75881;75882 | chr2:178534140;178534139;178534138 | chr2:179398867;179398866;179398865 |
Novex-2 | 25286 | 76081;76082;76083 | chr2:178534140;178534139;178534138 | chr2:179398867;179398866;179398865 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1690397017 | None | 0.999 | D | 0.779 | 0.743 | 0.800328269811 | gnomAD-4.0.0 | 1.59095E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85765E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9259 | likely_pathogenic | 0.9392 | pathogenic | -2.619 | Highly Destabilizing | 0.996 | D | 0.709 | prob.delet. | None | None | None | None | N |
I/C | 0.9888 | likely_pathogenic | 0.9921 | pathogenic | -1.797 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
I/D | 0.9964 | likely_pathogenic | 0.9971 | pathogenic | -2.912 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
I/E | 0.9856 | likely_pathogenic | 0.9882 | pathogenic | -2.689 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
I/F | 0.7806 | likely_pathogenic | 0.7828 | pathogenic | -1.581 | Destabilizing | 0.217 | N | 0.415 | neutral | N | 0.489245318 | None | None | N |
I/G | 0.9913 | likely_pathogenic | 0.993 | pathogenic | -3.159 | Highly Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
I/H | 0.9932 | likely_pathogenic | 0.9944 | pathogenic | -2.597 | Highly Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
I/K | 0.9757 | likely_pathogenic | 0.9797 | pathogenic | -1.984 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
I/L | 0.5045 | ambiguous | 0.4981 | ambiguous | -1.058 | Destabilizing | 0.889 | D | 0.451 | neutral | D | 0.522114619 | None | None | N |
I/M | 0.3442 | ambiguous | 0.3393 | benign | -0.97 | Destabilizing | 0.999 | D | 0.738 | prob.delet. | N | 0.494271747 | None | None | N |
I/N | 0.9572 | likely_pathogenic | 0.9623 | pathogenic | -2.317 | Highly Destabilizing | 0.999 | D | 0.821 | deleterious | D | 0.536161351 | None | None | N |
I/P | 0.9898 | likely_pathogenic | 0.9924 | pathogenic | -1.56 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
I/Q | 0.9829 | likely_pathogenic | 0.9854 | pathogenic | -2.189 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
I/R | 0.9682 | likely_pathogenic | 0.9739 | pathogenic | -1.666 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
I/S | 0.9518 | likely_pathogenic | 0.9589 | pathogenic | -3.006 | Highly Destabilizing | 0.999 | D | 0.81 | deleterious | D | 0.523328127 | None | None | N |
I/T | 0.8434 | likely_pathogenic | 0.8631 | pathogenic | -2.642 | Highly Destabilizing | 0.999 | D | 0.779 | deleterious | D | 0.534947843 | None | None | N |
I/V | 0.2143 | likely_benign | 0.2222 | benign | -1.56 | Destabilizing | 0.941 | D | 0.444 | neutral | N | 0.44860579 | None | None | N |
I/W | 0.9923 | likely_pathogenic | 0.9939 | pathogenic | -1.987 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
I/Y | 0.9721 | likely_pathogenic | 0.9765 | pathogenic | -1.707 | Destabilizing | 0.995 | D | 0.805 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.