Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34162 | 102709;102710;102711 | chr2:178534131;178534130;178534129 | chr2:179398858;179398857;179398856 |
N2AB | 32521 | 97786;97787;97788 | chr2:178534131;178534130;178534129 | chr2:179398858;179398857;179398856 |
N2A | 31594 | 95005;95006;95007 | chr2:178534131;178534130;178534129 | chr2:179398858;179398857;179398856 |
N2B | 25097 | 75514;75515;75516 | chr2:178534131;178534130;178534129 | chr2:179398858;179398857;179398856 |
Novex-1 | 25222 | 75889;75890;75891 | chr2:178534131;178534130;178534129 | chr2:179398858;179398857;179398856 |
Novex-2 | 25289 | 76090;76091;76092 | chr2:178534131;178534130;178534129 | chr2:179398858;179398857;179398856 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs1439821574 | -0.6 | 1.0 | N | 0.76 | 0.522 | 0.478605750892 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.7131 | likely_pathogenic | 0.6254 | pathogenic | -1.473 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
Y/C | 0.3976 | ambiguous | 0.3947 | ambiguous | -0.101 | Destabilizing | 1.0 | D | 0.763 | deleterious | N | 0.495403247 | None | None | N |
Y/D | 0.6345 | likely_pathogenic | 0.5476 | ambiguous | 0.102 | Stabilizing | 1.0 | D | 0.77 | deleterious | N | 0.513238845 | None | None | N |
Y/E | 0.8561 | likely_pathogenic | 0.7996 | pathogenic | 0.119 | Stabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
Y/F | 0.1435 | likely_benign | 0.1401 | benign | -0.76 | Destabilizing | 0.999 | D | 0.557 | neutral | N | 0.490922133 | None | None | N |
Y/G | 0.6942 | likely_pathogenic | 0.6127 | pathogenic | -1.735 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
Y/H | 0.3754 | ambiguous | 0.3022 | benign | -0.539 | Destabilizing | 1.0 | D | 0.76 | deleterious | N | 0.49873354 | None | None | N |
Y/I | 0.7598 | likely_pathogenic | 0.7039 | pathogenic | -0.738 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
Y/K | 0.7949 | likely_pathogenic | 0.7025 | pathogenic | -0.367 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
Y/L | 0.7222 | likely_pathogenic | 0.686 | pathogenic | -0.738 | Destabilizing | 0.999 | D | 0.688 | prob.neutral | None | None | None | None | N |
Y/M | 0.8195 | likely_pathogenic | 0.7863 | pathogenic | -0.349 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
Y/N | 0.4209 | ambiguous | 0.334 | benign | -0.493 | Destabilizing | 1.0 | D | 0.783 | deleterious | N | 0.491959496 | None | None | N |
Y/P | 0.8699 | likely_pathogenic | 0.8079 | pathogenic | -0.969 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
Y/Q | 0.778 | likely_pathogenic | 0.6897 | pathogenic | -0.472 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
Y/R | 0.6263 | likely_pathogenic | 0.5236 | ambiguous | -0.014 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
Y/S | 0.4166 | ambiguous | 0.3292 | benign | -0.947 | Destabilizing | 1.0 | D | 0.762 | deleterious | N | 0.481550501 | None | None | N |
Y/T | 0.6885 | likely_pathogenic | 0.6124 | pathogenic | -0.837 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
Y/V | 0.6383 | likely_pathogenic | 0.5778 | pathogenic | -0.969 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | N |
Y/W | 0.5798 | likely_pathogenic | 0.5488 | ambiguous | -0.685 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.