Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34171 | 102736;102737;102738 | chr2:178534104;178534103;178534102 | chr2:179398831;179398830;179398829 |
N2AB | 32530 | 97813;97814;97815 | chr2:178534104;178534103;178534102 | chr2:179398831;179398830;179398829 |
N2A | 31603 | 95032;95033;95034 | chr2:178534104;178534103;178534102 | chr2:179398831;179398830;179398829 |
N2B | 25106 | 75541;75542;75543 | chr2:178534104;178534103;178534102 | chr2:179398831;179398830;179398829 |
Novex-1 | 25231 | 75916;75917;75918 | chr2:178534104;178534103;178534102 | chr2:179398831;179398830;179398829 |
Novex-2 | 25298 | 76117;76118;76119 | chr2:178534104;178534103;178534102 | chr2:179398831;179398830;179398829 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | N | 0.783 | 0.529 | 0.61879682266 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9695 | likely_pathogenic | 0.9598 | pathogenic | -2.874 | Highly Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | I |
Y/C | 0.7974 | likely_pathogenic | 0.7851 | pathogenic | -1.26 | Destabilizing | 1.0 | D | 0.783 | deleterious | N | 0.4796494 | None | None | I |
Y/D | 0.9466 | likely_pathogenic | 0.9244 | pathogenic | -1.761 | Destabilizing | 1.0 | D | 0.785 | deleterious | N | 0.479395911 | None | None | I |
Y/E | 0.9821 | likely_pathogenic | 0.9732 | pathogenic | -1.651 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | I |
Y/F | 0.1871 | likely_benign | 0.1893 | benign | -1.22 | Destabilizing | 0.999 | D | 0.532 | neutral | N | 0.442143098 | None | None | I |
Y/G | 0.9491 | likely_pathogenic | 0.9365 | pathogenic | -3.206 | Highly Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | I |
Y/H | 0.6649 | likely_pathogenic | 0.623 | pathogenic | -1.433 | Destabilizing | 1.0 | D | 0.755 | deleterious | N | 0.46120275 | None | None | I |
Y/I | 0.9274 | likely_pathogenic | 0.9048 | pathogenic | -1.827 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | I |
Y/K | 0.9782 | likely_pathogenic | 0.9693 | pathogenic | -1.459 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | I |
Y/L | 0.87 | likely_pathogenic | 0.8484 | pathogenic | -1.827 | Destabilizing | 0.999 | D | 0.663 | neutral | None | None | None | None | I |
Y/M | 0.9317 | likely_pathogenic | 0.9119 | pathogenic | -1.416 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
Y/N | 0.7364 | likely_pathogenic | 0.6806 | pathogenic | -1.759 | Destabilizing | 1.0 | D | 0.775 | deleterious | N | 0.46145624 | None | None | I |
Y/P | 0.999 | likely_pathogenic | 0.9986 | pathogenic | -2.178 | Highly Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | I |
Y/Q | 0.9643 | likely_pathogenic | 0.9509 | pathogenic | -1.746 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | I |
Y/R | 0.9488 | likely_pathogenic | 0.932 | pathogenic | -0.901 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
Y/S | 0.8328 | likely_pathogenic | 0.7907 | pathogenic | -2.326 | Highly Destabilizing | 1.0 | D | 0.749 | deleterious | N | 0.47346887 | None | None | I |
Y/T | 0.9475 | likely_pathogenic | 0.927 | pathogenic | -2.125 | Highly Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
Y/V | 0.8998 | likely_pathogenic | 0.8724 | pathogenic | -2.178 | Highly Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
Y/W | 0.7449 | likely_pathogenic | 0.7304 | pathogenic | -0.604 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.