Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34182 | 102769;102770;102771 | chr2:178534071;178534070;178534069 | chr2:179398798;179398797;179398796 |
N2AB | 32541 | 97846;97847;97848 | chr2:178534071;178534070;178534069 | chr2:179398798;179398797;179398796 |
N2A | 31614 | 95065;95066;95067 | chr2:178534071;178534070;178534069 | chr2:179398798;179398797;179398796 |
N2B | 25117 | 75574;75575;75576 | chr2:178534071;178534070;178534069 | chr2:179398798;179398797;179398796 |
Novex-1 | 25242 | 75949;75950;75951 | chr2:178534071;178534070;178534069 | chr2:179398798;179398797;179398796 |
Novex-2 | 25309 | 76150;76151;76152 | chr2:178534071;178534070;178534069 | chr2:179398798;179398797;179398796 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs1348175807 | -0.736 | 1.0 | N | 0.695 | 0.48 | 0.326074293725 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
K/T | rs1348175807 | -0.736 | 1.0 | N | 0.695 | 0.48 | 0.326074293725 | gnomAD-4.0.0 | 4.77303E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57319E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8898 | likely_pathogenic | 0.9173 | pathogenic | -0.568 | Destabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | N |
K/C | 0.9679 | likely_pathogenic | 0.9788 | pathogenic | -0.515 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | N |
K/D | 0.8986 | likely_pathogenic | 0.9165 | pathogenic | 0.108 | Stabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
K/E | 0.719 | likely_pathogenic | 0.7797 | pathogenic | 0.217 | Stabilizing | 0.999 | D | 0.494 | neutral | N | 0.515950211 | None | None | N |
K/F | 0.976 | likely_pathogenic | 0.9813 | pathogenic | -0.296 | Destabilizing | 1.0 | D | 0.658 | neutral | None | None | None | None | N |
K/G | 0.9187 | likely_pathogenic | 0.9399 | pathogenic | -0.922 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | N |
K/H | 0.7162 | likely_pathogenic | 0.747 | pathogenic | -1.209 | Destabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | N |
K/I | 0.8249 | likely_pathogenic | 0.8659 | pathogenic | 0.341 | Stabilizing | 1.0 | D | 0.671 | neutral | N | 0.464961732 | None | None | N |
K/L | 0.8068 | likely_pathogenic | 0.8412 | pathogenic | 0.341 | Stabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | N |
K/M | 0.707 | likely_pathogenic | 0.7587 | pathogenic | 0.188 | Stabilizing | 1.0 | D | 0.628 | neutral | None | None | None | None | N |
K/N | 0.7908 | likely_pathogenic | 0.8342 | pathogenic | -0.359 | Destabilizing | 1.0 | D | 0.656 | neutral | N | 0.45513591 | None | None | N |
K/P | 0.9626 | likely_pathogenic | 0.9717 | pathogenic | 0.069 | Stabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
K/Q | 0.5852 | likely_pathogenic | 0.6517 | pathogenic | -0.4 | Destabilizing | 1.0 | D | 0.633 | neutral | N | 0.456403357 | None | None | N |
K/R | 0.1834 | likely_benign | 0.2131 | benign | -0.503 | Destabilizing | 0.999 | D | 0.498 | neutral | N | 0.449815645 | None | None | N |
K/S | 0.9063 | likely_pathogenic | 0.9317 | pathogenic | -1.036 | Destabilizing | 0.999 | D | 0.588 | neutral | None | None | None | None | N |
K/T | 0.6517 | likely_pathogenic | 0.7127 | pathogenic | -0.717 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | N | 0.455896378 | None | None | N |
K/V | 0.8413 | likely_pathogenic | 0.8759 | pathogenic | 0.069 | Stabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
K/W | 0.9733 | likely_pathogenic | 0.9803 | pathogenic | -0.177 | Destabilizing | 1.0 | D | 0.654 | neutral | None | None | None | None | N |
K/Y | 0.8986 | likely_pathogenic | 0.9183 | pathogenic | 0.109 | Stabilizing | 1.0 | D | 0.635 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.