Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34187 | 102784;102785;102786 | chr2:178534056;178534055;178534054 | chr2:179398783;179398782;179398781 |
N2AB | 32546 | 97861;97862;97863 | chr2:178534056;178534055;178534054 | chr2:179398783;179398782;179398781 |
N2A | 31619 | 95080;95081;95082 | chr2:178534056;178534055;178534054 | chr2:179398783;179398782;179398781 |
N2B | 25122 | 75589;75590;75591 | chr2:178534056;178534055;178534054 | chr2:179398783;179398782;179398781 |
Novex-1 | 25247 | 75964;75965;75966 | chr2:178534056;178534055;178534054 | chr2:179398783;179398782;179398781 |
Novex-2 | 25314 | 76165;76166;76167 | chr2:178534056;178534055;178534054 | chr2:179398783;179398782;179398781 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1354824295 | -0.677 | 1.0 | N | 0.805 | 0.588 | 0.652883116041 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 9.94E-05 | 0 | None | 0 | None | 0 | 0 | 0 |
Y/C | rs1354824295 | -0.677 | 1.0 | N | 0.805 | 0.588 | 0.652883116041 | gnomAD-4.0.0 | 1.59097E-06 | None | None | None | None | N | None | 0 | 0 | None | 4.76599E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.7878 | likely_pathogenic | 0.753 | pathogenic | -1.828 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
Y/C | 0.3497 | ambiguous | 0.3807 | ambiguous | -0.759 | Destabilizing | 1.0 | D | 0.805 | deleterious | N | 0.521765115 | None | None | N |
Y/D | 0.7024 | likely_pathogenic | 0.6649 | pathogenic | -0.081 | Destabilizing | 1.0 | D | 0.808 | deleterious | D | 0.529056447 | None | None | N |
Y/E | 0.8432 | likely_pathogenic | 0.8161 | pathogenic | 0.005 | Stabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
Y/F | 0.1386 | likely_benign | 0.1325 | benign | -0.602 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | N | 0.493866438 | None | None | N |
Y/G | 0.7787 | likely_pathogenic | 0.7357 | pathogenic | -2.142 | Highly Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
Y/H | 0.395 | ambiguous | 0.3761 | ambiguous | -0.624 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | N | 0.497080101 | None | None | N |
Y/I | 0.6863 | likely_pathogenic | 0.6727 | pathogenic | -0.9 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
Y/K | 0.801 | likely_pathogenic | 0.7689 | pathogenic | -0.866 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
Y/L | 0.6028 | likely_pathogenic | 0.5865 | pathogenic | -0.9 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
Y/M | 0.725 | likely_pathogenic | 0.6967 | pathogenic | -0.709 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
Y/N | 0.4661 | ambiguous | 0.4225 | ambiguous | -1.2 | Destabilizing | 1.0 | D | 0.807 | deleterious | N | 0.490575416 | None | None | N |
Y/P | 0.96 | likely_pathogenic | 0.9572 | pathogenic | -1.201 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
Y/Q | 0.7801 | likely_pathogenic | 0.7549 | pathogenic | -1.056 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
Y/R | 0.6559 | likely_pathogenic | 0.6186 | pathogenic | -0.562 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
Y/S | 0.4349 | ambiguous | 0.388 | ambiguous | -1.771 | Destabilizing | 1.0 | D | 0.809 | deleterious | N | 0.458599071 | None | None | N |
Y/T | 0.6742 | likely_pathogenic | 0.6364 | pathogenic | -1.586 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
Y/V | 0.5489 | ambiguous | 0.5374 | ambiguous | -1.201 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
Y/W | 0.4666 | ambiguous | 0.4566 | ambiguous | -0.272 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.