Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34188 | 102787;102788;102789 | chr2:178534053;178534052;178534051 | chr2:179398780;179398779;179398778 |
N2AB | 32547 | 97864;97865;97866 | chr2:178534053;178534052;178534051 | chr2:179398780;179398779;179398778 |
N2A | 31620 | 95083;95084;95085 | chr2:178534053;178534052;178534051 | chr2:179398780;179398779;179398778 |
N2B | 25123 | 75592;75593;75594 | chr2:178534053;178534052;178534051 | chr2:179398780;179398779;179398778 |
Novex-1 | 25248 | 75967;75968;75969 | chr2:178534053;178534052;178534051 | chr2:179398780;179398779;179398778 |
Novex-2 | 25315 | 76168;76169;76170 | chr2:178534053;178534052;178534051 | chr2:179398780;179398779;179398778 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs577667352 | 0.645 | 0.064 | N | 0.239 | 0.167 | 0.247322355667 | gnomAD-2.1.1 | 5.22E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.63399E-04 | None | 0 | 7.09E-05 | 0 |
E/K | rs577667352 | 0.645 | 0.064 | N | 0.239 | 0.167 | 0.247322355667 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 4.1425E-04 | 0 |
E/K | rs577667352 | 0.645 | 0.064 | N | 0.239 | 0.167 | 0.247322355667 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 0 | 0 | None | None | None | 1E-03 | None |
E/K | rs577667352 | 0.645 | 0.064 | N | 0.239 | 0.167 | 0.247322355667 | gnomAD-4.0.0 | 3.03603E-05 | None | None | None | None | N | None | 0 | 1.66628E-05 | None | 0 | 2.22806E-05 | None | 1.5624E-05 | 0 | 2.28842E-05 | 1.86649E-04 | 3.20061E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2022 | likely_benign | 0.1994 | benign | -0.436 | Destabilizing | None | N | 0.174 | neutral | N | 0.496234739 | None | None | N |
E/C | 0.853 | likely_pathogenic | 0.875 | pathogenic | -0.309 | Destabilizing | 0.676 | D | 0.205 | neutral | None | None | None | None | N |
E/D | 0.2116 | likely_benign | 0.2166 | benign | -0.347 | Destabilizing | None | N | 0.187 | neutral | N | 0.474896675 | None | None | N |
E/F | 0.8379 | likely_pathogenic | 0.8436 | pathogenic | -0.118 | Destabilizing | 0.356 | N | 0.253 | neutral | None | None | None | None | N |
E/G | 0.2547 | likely_benign | 0.2576 | benign | -0.644 | Destabilizing | 0.012 | N | 0.243 | neutral | N | 0.485798596 | None | None | N |
E/H | 0.3956 | ambiguous | 0.3883 | ambiguous | 0.277 | Stabilizing | 0.001 | N | 0.173 | neutral | None | None | None | None | N |
E/I | 0.411 | ambiguous | 0.4238 | ambiguous | 0.086 | Stabilizing | 0.214 | N | 0.299 | neutral | None | None | None | None | N |
E/K | 0.106 | likely_benign | 0.1032 | benign | 0.216 | Stabilizing | 0.064 | N | 0.239 | neutral | N | 0.513529634 | None | None | N |
E/L | 0.4928 | ambiguous | 0.503 | ambiguous | 0.086 | Stabilizing | 0.038 | N | 0.339 | neutral | None | None | None | None | N |
E/M | 0.5079 | ambiguous | 0.5181 | ambiguous | 0.034 | Stabilizing | 0.356 | N | 0.225 | neutral | None | None | None | None | N |
E/N | 0.2847 | likely_benign | 0.2887 | benign | -0.266 | Destabilizing | None | N | 0.133 | neutral | None | None | None | None | N |
E/P | 0.9328 | likely_pathogenic | 0.9395 | pathogenic | -0.068 | Destabilizing | 0.072 | N | 0.304 | neutral | None | None | None | None | N |
E/Q | 0.1076 | likely_benign | 0.106 | benign | -0.196 | Destabilizing | None | N | 0.191 | neutral | N | 0.496234739 | None | None | N |
E/R | 0.1841 | likely_benign | 0.1792 | benign | 0.548 | Stabilizing | 0.038 | N | 0.202 | neutral | None | None | None | None | N |
E/S | 0.2256 | likely_benign | 0.2276 | benign | -0.412 | Destabilizing | 0.001 | N | 0.133 | neutral | None | None | None | None | N |
E/T | 0.2254 | likely_benign | 0.2287 | benign | -0.23 | Destabilizing | 0.016 | N | 0.271 | neutral | None | None | None | None | N |
E/V | 0.2592 | likely_benign | 0.2688 | benign | -0.068 | Destabilizing | 0.029 | N | 0.335 | neutral | N | 0.511492193 | None | None | N |
E/W | 0.9234 | likely_pathogenic | 0.9261 | pathogenic | 0.093 | Stabilizing | 0.864 | D | 0.215 | neutral | None | None | None | None | N |
E/Y | 0.7051 | likely_pathogenic | 0.7088 | pathogenic | 0.134 | Stabilizing | 0.214 | N | 0.285 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.