Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34190 | 102793;102794;102795 | chr2:178534047;178534046;178534045 | chr2:179398774;179398773;179398772 |
N2AB | 32549 | 97870;97871;97872 | chr2:178534047;178534046;178534045 | chr2:179398774;179398773;179398772 |
N2A | 31622 | 95089;95090;95091 | chr2:178534047;178534046;178534045 | chr2:179398774;179398773;179398772 |
N2B | 25125 | 75598;75599;75600 | chr2:178534047;178534046;178534045 | chr2:179398774;179398773;179398772 |
Novex-1 | 25250 | 75973;75974;75975 | chr2:178534047;178534046;178534045 | chr2:179398774;179398773;179398772 |
Novex-2 | 25317 | 76174;76175;76176 | chr2:178534047;178534046;178534045 | chr2:179398774;179398773;179398772 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | rs1690354224 | None | 1.0 | N | 0.815 | 0.564 | 0.735684033563 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
G/E | rs1690354224 | None | 1.0 | N | 0.815 | 0.564 | 0.735684033563 | gnomAD-4.0.0 | 3.84243E-06 | None | None | None | None | N | None | 0 | 3.38926E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 2.84349E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.5143 | ambiguous | 0.5355 | ambiguous | -0.296 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | N | 0.501568539 | None | None | N |
G/C | 0.6739 | likely_pathogenic | 0.726 | pathogenic | -0.386 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
G/D | 0.5569 | ambiguous | 0.6162 | pathogenic | -0.838 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
G/E | 0.6154 | likely_pathogenic | 0.6745 | pathogenic | -0.8 | Destabilizing | 1.0 | D | 0.815 | deleterious | N | 0.520628965 | None | None | N |
G/F | 0.9654 | likely_pathogenic | 0.972 | pathogenic | -0.516 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
G/H | 0.7717 | likely_pathogenic | 0.8065 | pathogenic | -1.25 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
G/I | 0.9422 | likely_pathogenic | 0.9512 | pathogenic | 0.364 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
G/K | 0.7305 | likely_pathogenic | 0.7572 | pathogenic | -0.831 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
G/L | 0.9459 | likely_pathogenic | 0.9532 | pathogenic | 0.364 | Stabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
G/M | 0.93 | likely_pathogenic | 0.9398 | pathogenic | 0.265 | Stabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
G/N | 0.5982 | likely_pathogenic | 0.6401 | pathogenic | -0.681 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
G/P | 0.9931 | likely_pathogenic | 0.9947 | pathogenic | 0.189 | Stabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
G/Q | 0.6835 | likely_pathogenic | 0.7279 | pathogenic | -0.673 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
G/R | 0.6036 | likely_pathogenic | 0.642 | pathogenic | -0.804 | Destabilizing | 1.0 | D | 0.801 | deleterious | N | 0.499077005 | None | None | N |
G/S | 0.2723 | likely_benign | 0.2972 | benign | -0.978 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
G/T | 0.724 | likely_pathogenic | 0.7489 | pathogenic | -0.837 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
G/V | 0.8926 | likely_pathogenic | 0.9109 | pathogenic | 0.189 | Stabilizing | 1.0 | D | 0.801 | deleterious | N | 0.510940289 | None | None | N |
G/W | 0.9239 | likely_pathogenic | 0.9407 | pathogenic | -1.148 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
G/Y | 0.9042 | likely_pathogenic | 0.9201 | pathogenic | -0.547 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.