Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34194 | 102805;102806;102807 | chr2:178534035;178534034;178534033 | chr2:179398762;179398761;179398760 |
N2AB | 32553 | 97882;97883;97884 | chr2:178534035;178534034;178534033 | chr2:179398762;179398761;179398760 |
N2A | 31626 | 95101;95102;95103 | chr2:178534035;178534034;178534033 | chr2:179398762;179398761;179398760 |
N2B | 25129 | 75610;75611;75612 | chr2:178534035;178534034;178534033 | chr2:179398762;179398761;179398760 |
Novex-1 | 25254 | 75985;75986;75987 | chr2:178534035;178534034;178534033 | chr2:179398762;179398761;179398760 |
Novex-2 | 25321 | 76186;76187;76188 | chr2:178534035;178534034;178534033 | chr2:179398762;179398761;179398760 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | rs745744350 | -0.594 | None | N | 0.296 | 0.179 | 0.549121438896 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.86E-06 | 0 |
L/I | rs745744350 | -0.594 | None | N | 0.296 | 0.179 | 0.549121438896 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/I | rs745744350 | -0.594 | None | N | 0.296 | 0.179 | 0.549121438896 | gnomAD-4.0.0 | 6.08965E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.02465E-06 | 0 | 3.40275E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7729 | likely_pathogenic | 0.736 | pathogenic | -2.555 | Highly Destabilizing | 0.035 | N | 0.721 | prob.delet. | None | None | None | None | N |
L/C | 0.7977 | likely_pathogenic | 0.7865 | pathogenic | -1.513 | Destabilizing | 0.935 | D | 0.801 | deleterious | None | None | None | None | N |
L/D | 0.9978 | likely_pathogenic | 0.9976 | pathogenic | -3.206 | Highly Destabilizing | 0.555 | D | 0.863 | deleterious | None | None | None | None | N |
L/E | 0.9823 | likely_pathogenic | 0.9776 | pathogenic | -2.897 | Highly Destabilizing | 0.555 | D | 0.85 | deleterious | None | None | None | None | N |
L/F | 0.5481 | ambiguous | 0.5422 | ambiguous | -1.592 | Destabilizing | 0.317 | N | 0.696 | prob.neutral | N | 0.515938082 | None | None | N |
L/G | 0.9558 | likely_pathogenic | 0.9451 | pathogenic | -3.104 | Highly Destabilizing | 0.38 | N | 0.842 | deleterious | None | None | None | None | N |
L/H | 0.9632 | likely_pathogenic | 0.9593 | pathogenic | -2.933 | Highly Destabilizing | 0.915 | D | 0.865 | deleterious | D | 0.529322304 | None | None | N |
L/I | 0.2373 | likely_benign | 0.226 | benign | -0.875 | Destabilizing | None | N | 0.296 | neutral | N | 0.516884944 | None | None | N |
L/K | 0.9597 | likely_pathogenic | 0.9505 | pathogenic | -1.996 | Destabilizing | 0.38 | N | 0.829 | deleterious | None | None | None | None | N |
L/M | 0.1046 | likely_benign | 0.0929 | benign | -1.039 | Destabilizing | 0.002 | N | 0.418 | neutral | None | None | None | None | N |
L/N | 0.9758 | likely_pathogenic | 0.9727 | pathogenic | -2.797 | Highly Destabilizing | 0.555 | D | 0.868 | deleterious | None | None | None | None | N |
L/P | 0.993 | likely_pathogenic | 0.9925 | pathogenic | -1.431 | Destabilizing | 0.741 | D | 0.866 | deleterious | D | 0.529322304 | None | None | N |
L/Q | 0.9025 | likely_pathogenic | 0.8777 | pathogenic | -2.366 | Highly Destabilizing | 0.38 | N | 0.856 | deleterious | None | None | None | None | N |
L/R | 0.9504 | likely_pathogenic | 0.9427 | pathogenic | -2.262 | Highly Destabilizing | 0.317 | N | 0.852 | deleterious | D | 0.529322304 | None | None | N |
L/S | 0.942 | likely_pathogenic | 0.9331 | pathogenic | -3.156 | Highly Destabilizing | 0.149 | N | 0.829 | deleterious | None | None | None | None | N |
L/T | 0.8582 | likely_pathogenic | 0.8318 | pathogenic | -2.69 | Highly Destabilizing | 0.149 | N | 0.753 | deleterious | None | None | None | None | N |
L/V | 0.2577 | likely_benign | 0.2491 | benign | -1.431 | Destabilizing | 0.004 | N | 0.487 | neutral | N | 0.504670682 | None | None | N |
L/W | 0.9535 | likely_pathogenic | 0.9518 | pathogenic | -1.858 | Destabilizing | 0.935 | D | 0.854 | deleterious | None | None | None | None | N |
L/Y | 0.9499 | likely_pathogenic | 0.9476 | pathogenic | -1.768 | Destabilizing | 0.555 | D | 0.799 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.