Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34206 | 102841;102842;102843 | chr2:178533999;178533998;178533997 | chr2:179398726;179398725;179398724 |
N2AB | 32565 | 97918;97919;97920 | chr2:178533999;178533998;178533997 | chr2:179398726;179398725;179398724 |
N2A | 31638 | 95137;95138;95139 | chr2:178533999;178533998;178533997 | chr2:179398726;179398725;179398724 |
N2B | 25141 | 75646;75647;75648 | chr2:178533999;178533998;178533997 | chr2:179398726;179398725;179398724 |
Novex-1 | 25266 | 76021;76022;76023 | chr2:178533999;178533998;178533997 | chr2:179398726;179398725;179398724 |
Novex-2 | 25333 | 76222;76223;76224 | chr2:178533999;178533998;178533997 | chr2:179398726;179398725;179398724 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs767516936 | -0.362 | 0.051 | N | 0.279 | 0.153 | 0.350088858571 | gnomAD-2.1.1 | 8.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
T/I | rs767516936 | -0.362 | 0.051 | N | 0.279 | 0.153 | 0.350088858571 | gnomAD-4.0.0 | 1.59103E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2382 | likely_benign | 0.2577 | benign | -1.227 | Destabilizing | 0.625 | D | 0.445 | neutral | N | 0.51479907 | None | None | I |
T/C | 0.7492 | likely_pathogenic | 0.7885 | pathogenic | -0.53 | Destabilizing | 0.998 | D | 0.539 | neutral | None | None | None | None | I |
T/D | 0.8353 | likely_pathogenic | 0.8652 | pathogenic | 0.205 | Stabilizing | 0.842 | D | 0.533 | neutral | None | None | None | None | I |
T/E | 0.7564 | likely_pathogenic | 0.7949 | pathogenic | 0.292 | Stabilizing | 0.842 | D | 0.489 | neutral | None | None | None | None | I |
T/F | 0.6596 | likely_pathogenic | 0.6908 | pathogenic | -1.185 | Destabilizing | 0.974 | D | 0.584 | neutral | None | None | None | None | I |
T/G | 0.6762 | likely_pathogenic | 0.6962 | pathogenic | -1.54 | Destabilizing | 0.842 | D | 0.533 | neutral | None | None | None | None | I |
T/H | 0.6667 | likely_pathogenic | 0.7026 | pathogenic | -1.527 | Destabilizing | 0.037 | N | 0.387 | neutral | None | None | None | None | I |
T/I | 0.3404 | ambiguous | 0.3531 | ambiguous | -0.449 | Destabilizing | 0.051 | N | 0.279 | neutral | N | 0.477800907 | None | None | I |
T/K | 0.6143 | likely_pathogenic | 0.6406 | pathogenic | -0.263 | Destabilizing | 0.842 | D | 0.495 | neutral | None | None | None | None | I |
T/L | 0.2776 | likely_benign | 0.2897 | benign | -0.449 | Destabilizing | 0.525 | D | 0.409 | neutral | None | None | None | None | I |
T/M | 0.2316 | likely_benign | 0.2493 | benign | -0.286 | Destabilizing | 0.974 | D | 0.561 | neutral | None | None | None | None | I |
T/N | 0.358 | ambiguous | 0.4019 | ambiguous | -0.429 | Destabilizing | 0.801 | D | 0.505 | neutral | N | 0.496560026 | None | None | I |
T/P | 0.5012 | ambiguous | 0.5623 | ambiguous | -0.678 | Destabilizing | 0.989 | D | 0.559 | neutral | D | 0.533827548 | None | None | I |
T/Q | 0.597 | likely_pathogenic | 0.6332 | pathogenic | -0.429 | Destabilizing | 0.949 | D | 0.569 | neutral | None | None | None | None | I |
T/R | 0.5324 | ambiguous | 0.569 | pathogenic | -0.226 | Destabilizing | 0.949 | D | 0.566 | neutral | None | None | None | None | I |
T/S | 0.3285 | likely_benign | 0.3526 | ambiguous | -0.903 | Destabilizing | 0.801 | D | 0.507 | neutral | N | 0.475664679 | None | None | I |
T/V | 0.2878 | likely_benign | 0.3009 | benign | -0.678 | Destabilizing | 0.029 | N | 0.17 | neutral | None | None | None | None | I |
T/W | 0.89 | likely_pathogenic | 0.9023 | pathogenic | -1.065 | Destabilizing | 0.998 | D | 0.608 | neutral | None | None | None | None | I |
T/Y | 0.6483 | likely_pathogenic | 0.6831 | pathogenic | -0.807 | Destabilizing | 0.949 | D | 0.587 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.