Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34207 | 102844;102845;102846 | chr2:178533996;178533995;178533994 | chr2:179398723;179398722;179398721 |
N2AB | 32566 | 97921;97922;97923 | chr2:178533996;178533995;178533994 | chr2:179398723;179398722;179398721 |
N2A | 31639 | 95140;95141;95142 | chr2:178533996;178533995;178533994 | chr2:179398723;179398722;179398721 |
N2B | 25142 | 75649;75650;75651 | chr2:178533996;178533995;178533994 | chr2:179398723;179398722;179398721 |
Novex-1 | 25267 | 76024;76025;76026 | chr2:178533996;178533995;178533994 | chr2:179398723;179398722;179398721 |
Novex-2 | 25334 | 76225;76226;76227 | chr2:178533996;178533995;178533994 | chr2:179398723;179398722;179398721 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | None | None | 1.0 | D | 0.785 | 0.87 | 0.601041065218 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9965 | likely_pathogenic | 0.9958 | pathogenic | -1.786 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
Y/C | 0.9502 | likely_pathogenic | 0.948 | pathogenic | -1.029 | Destabilizing | 1.0 | D | 0.888 | deleterious | D | 0.596775221 | None | None | N |
Y/D | 0.9985 | likely_pathogenic | 0.9983 | pathogenic | -2.638 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | D | 0.596775221 | None | None | N |
Y/E | 0.9993 | likely_pathogenic | 0.9992 | pathogenic | -2.399 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
Y/F | 0.2064 | likely_benign | 0.2386 | benign | -0.626 | Destabilizing | 0.999 | D | 0.666 | neutral | D | 0.557176865 | None | None | N |
Y/G | 0.9946 | likely_pathogenic | 0.9936 | pathogenic | -2.209 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
Y/H | 0.9789 | likely_pathogenic | 0.9788 | pathogenic | -2.06 | Highly Destabilizing | 1.0 | D | 0.785 | deleterious | D | 0.596573416 | None | None | N |
Y/I | 0.9404 | likely_pathogenic | 0.9385 | pathogenic | -0.39 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
Y/K | 0.9988 | likely_pathogenic | 0.9987 | pathogenic | -1.501 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
Y/L | 0.8605 | likely_pathogenic | 0.8491 | pathogenic | -0.39 | Destabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | N |
Y/M | 0.9792 | likely_pathogenic | 0.979 | pathogenic | -0.513 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
Y/N | 0.9918 | likely_pathogenic | 0.9906 | pathogenic | -2.412 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | D | 0.596775221 | None | None | N |
Y/P | 0.9985 | likely_pathogenic | 0.9981 | pathogenic | -0.87 | Destabilizing | 1.0 | D | 0.918 | deleterious | None | None | None | None | N |
Y/Q | 0.9989 | likely_pathogenic | 0.9987 | pathogenic | -1.907 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
Y/R | 0.995 | likely_pathogenic | 0.9943 | pathogenic | -2.022 | Highly Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
Y/S | 0.9895 | likely_pathogenic | 0.988 | pathogenic | -2.578 | Highly Destabilizing | 1.0 | D | 0.905 | deleterious | D | 0.596775221 | None | None | N |
Y/T | 0.9968 | likely_pathogenic | 0.9963 | pathogenic | -2.192 | Highly Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
Y/V | 0.9152 | likely_pathogenic | 0.9091 | pathogenic | -0.87 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
Y/W | 0.8257 | likely_pathogenic | 0.8269 | pathogenic | -0.117 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.