Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34215 | 102868;102869;102870 | chr2:178533972;178533971;178533970 | chr2:179398699;179398698;179398697 |
N2AB | 32574 | 97945;97946;97947 | chr2:178533972;178533971;178533970 | chr2:179398699;179398698;179398697 |
N2A | 31647 | 95164;95165;95166 | chr2:178533972;178533971;178533970 | chr2:179398699;179398698;179398697 |
N2B | 25150 | 75673;75674;75675 | chr2:178533972;178533971;178533970 | chr2:179398699;179398698;179398697 |
Novex-1 | 25275 | 76048;76049;76050 | chr2:178533972;178533971;178533970 | chr2:179398699;179398698;179398697 |
Novex-2 | 25342 | 76249;76250;76251 | chr2:178533972;178533971;178533970 | chr2:179398699;179398698;179398697 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs2154135557 | None | 0.999 | N | 0.569 | 0.569 | 0.600692567571 | gnomAD-4.0.0 | 3.18211E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.54539E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.6038 | likely_pathogenic | 0.5636 | ambiguous | -0.339 | Destabilizing | 0.148 | N | 0.398 | neutral | None | None | None | None | N |
Y/C | 0.3594 | ambiguous | 0.384 | ambiguous | 0.28 | Stabilizing | 0.999 | D | 0.569 | neutral | N | 0.487365078 | None | None | N |
Y/D | 0.3903 | ambiguous | 0.351 | ambiguous | 0.806 | Stabilizing | 0.068 | N | 0.427 | neutral | N | 0.506603662 | None | None | N |
Y/E | 0.7255 | likely_pathogenic | 0.7011 | pathogenic | 0.769 | Stabilizing | 0.939 | D | 0.555 | neutral | None | None | None | None | N |
Y/F | 0.1229 | likely_benign | 0.121 | benign | -0.234 | Destabilizing | 0.993 | D | 0.449 | neutral | N | 0.465813045 | None | None | N |
Y/G | 0.6445 | likely_pathogenic | 0.5918 | pathogenic | -0.494 | Destabilizing | 0.927 | D | 0.561 | neutral | None | None | None | None | N |
Y/H | 0.3119 | likely_benign | 0.2953 | benign | 0.364 | Stabilizing | 0.994 | D | 0.447 | neutral | N | 0.479225059 | None | None | N |
Y/I | 0.6771 | likely_pathogenic | 0.65 | pathogenic | 0.025 | Stabilizing | 0.995 | D | 0.537 | neutral | None | None | None | None | N |
Y/K | 0.7316 | likely_pathogenic | 0.6787 | pathogenic | 0.379 | Stabilizing | 0.969 | D | 0.579 | neutral | None | None | None | None | N |
Y/L | 0.588 | likely_pathogenic | 0.5525 | ambiguous | 0.025 | Stabilizing | 0.969 | D | 0.511 | neutral | None | None | None | None | N |
Y/M | 0.7188 | likely_pathogenic | 0.69 | pathogenic | 0.057 | Stabilizing | 0.999 | D | 0.555 | neutral | None | None | None | None | N |
Y/N | 0.2793 | likely_benign | 0.2534 | benign | 0.195 | Stabilizing | 0.238 | N | 0.42 | neutral | N | 0.479225059 | None | None | N |
Y/P | 0.9839 | likely_pathogenic | 0.9788 | pathogenic | -0.076 | Destabilizing | 0.995 | D | 0.554 | neutral | None | None | None | None | N |
Y/Q | 0.6902 | likely_pathogenic | 0.6537 | pathogenic | 0.235 | Stabilizing | 0.995 | D | 0.551 | neutral | None | None | None | None | N |
Y/R | 0.5568 | ambiguous | 0.4988 | ambiguous | 0.556 | Stabilizing | 0.995 | D | 0.572 | neutral | None | None | None | None | N |
Y/S | 0.3119 | likely_benign | 0.2889 | benign | -0.136 | Destabilizing | 0.828 | D | 0.562 | neutral | N | 0.480262422 | None | None | N |
Y/T | 0.6273 | likely_pathogenic | 0.5861 | pathogenic | -0.083 | Destabilizing | 0.969 | D | 0.583 | neutral | None | None | None | None | N |
Y/V | 0.5418 | ambiguous | 0.5105 | ambiguous | -0.076 | Destabilizing | 0.969 | D | 0.548 | neutral | None | None | None | None | N |
Y/W | 0.5784 | likely_pathogenic | 0.5695 | pathogenic | -0.473 | Destabilizing | 1.0 | D | 0.469 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.