Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34224 | 102895;102896;102897 | chr2:178533945;178533944;178533943 | chr2:179398672;179398671;179398670 |
N2AB | 32583 | 97972;97973;97974 | chr2:178533945;178533944;178533943 | chr2:179398672;179398671;179398670 |
N2A | 31656 | 95191;95192;95193 | chr2:178533945;178533944;178533943 | chr2:179398672;179398671;179398670 |
N2B | 25159 | 75700;75701;75702 | chr2:178533945;178533944;178533943 | chr2:179398672;179398671;179398670 |
Novex-1 | 25284 | 76075;76076;76077 | chr2:178533945;178533944;178533943 | chr2:179398672;179398671;179398670 |
Novex-2 | 25351 | 76276;76277;76278 | chr2:178533945;178533944;178533943 | chr2:179398672;179398671;179398670 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.999 | N | 0.582 | 0.39 | 0.444102476654 | gnomAD-4.0.0 | 1.59123E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43279E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9298 | likely_pathogenic | 0.9172 | pathogenic | -2.801 | Highly Destabilizing | 0.999 | D | 0.784 | deleterious | None | None | None | None | N |
L/C | 0.9363 | likely_pathogenic | 0.9258 | pathogenic | -1.642 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
L/D | 0.9974 | likely_pathogenic | 0.9974 | pathogenic | -3.316 | Highly Destabilizing | 1.0 | D | 0.914 | deleterious | None | None | None | None | N |
L/E | 0.9901 | likely_pathogenic | 0.9891 | pathogenic | -2.99 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
L/F | 0.7355 | likely_pathogenic | 0.7574 | pathogenic | -1.712 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
L/G | 0.9835 | likely_pathogenic | 0.9752 | pathogenic | -3.406 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
L/H | 0.971 | likely_pathogenic | 0.972 | pathogenic | -3.103 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
L/I | 0.27 | likely_benign | 0.2943 | benign | -0.97 | Destabilizing | 0.999 | D | 0.582 | neutral | N | 0.48787424 | None | None | N |
L/K | 0.9769 | likely_pathogenic | 0.9758 | pathogenic | -1.963 | Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
L/M | 0.4038 | ambiguous | 0.3983 | ambiguous | -1.007 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
L/N | 0.9764 | likely_pathogenic | 0.9753 | pathogenic | -2.678 | Highly Destabilizing | 1.0 | D | 0.914 | deleterious | None | None | None | None | N |
L/P | 0.9961 | likely_pathogenic | 0.9963 | pathogenic | -1.574 | Destabilizing | 1.0 | D | 0.913 | deleterious | N | 0.518935098 | None | None | N |
L/Q | 0.964 | likely_pathogenic | 0.9601 | pathogenic | -2.309 | Highly Destabilizing | 1.0 | D | 0.923 | deleterious | N | 0.507578792 | None | None | N |
L/R | 0.9648 | likely_pathogenic | 0.9592 | pathogenic | -2.068 | Highly Destabilizing | 1.0 | D | 0.92 | deleterious | N | 0.518935098 | None | None | N |
L/S | 0.9839 | likely_pathogenic | 0.9815 | pathogenic | -3.211 | Highly Destabilizing | 1.0 | D | 0.916 | deleterious | None | None | None | None | N |
L/T | 0.9415 | likely_pathogenic | 0.9325 | pathogenic | -2.724 | Highly Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
L/V | 0.3592 | ambiguous | 0.3619 | ambiguous | -1.574 | Destabilizing | 0.999 | D | 0.575 | neutral | N | 0.512691767 | None | None | N |
L/W | 0.9648 | likely_pathogenic | 0.9665 | pathogenic | -2.097 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
L/Y | 0.9444 | likely_pathogenic | 0.9503 | pathogenic | -1.906 | Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.