Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34226 | 102901;102902;102903 | chr2:178533939;178533938;178533937 | chr2:179398666;179398665;179398664 |
N2AB | 32585 | 97978;97979;97980 | chr2:178533939;178533938;178533937 | chr2:179398666;179398665;179398664 |
N2A | 31658 | 95197;95198;95199 | chr2:178533939;178533938;178533937 | chr2:179398666;179398665;179398664 |
N2B | 25161 | 75706;75707;75708 | chr2:178533939;178533938;178533937 | chr2:179398666;179398665;179398664 |
Novex-1 | 25286 | 76081;76082;76083 | chr2:178533939;178533938;178533937 | chr2:179398666;179398665;179398664 |
Novex-2 | 25353 | 76282;76283;76284 | chr2:178533939;178533938;178533937 | chr2:179398666;179398665;179398664 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.997 | D | 0.759 | 0.761 | 0.697533386117 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8329 | likely_pathogenic | 0.841 | pathogenic | -1.851 | Destabilizing | 0.999 | D | 0.749 | deleterious | D | 0.589729918 | None | None | N |
V/C | 0.9536 | likely_pathogenic | 0.9593 | pathogenic | -1.239 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
V/D | 0.986 | likely_pathogenic | 0.9854 | pathogenic | -1.831 | Destabilizing | 1.0 | D | 0.862 | deleterious | D | 0.590335331 | None | None | N |
V/E | 0.9568 | likely_pathogenic | 0.9571 | pathogenic | -1.764 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
V/F | 0.8035 | likely_pathogenic | 0.7981 | pathogenic | -1.234 | Destabilizing | 1.0 | D | 0.88 | deleterious | D | 0.589729918 | None | None | N |
V/G | 0.8876 | likely_pathogenic | 0.876 | pathogenic | -2.241 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | D | 0.590335331 | None | None | N |
V/H | 0.9862 | likely_pathogenic | 0.9854 | pathogenic | -1.783 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
V/I | 0.1514 | likely_benign | 0.1494 | benign | -0.836 | Destabilizing | 0.997 | D | 0.725 | prob.delet. | N | 0.504598684 | None | None | N |
V/K | 0.9574 | likely_pathogenic | 0.9563 | pathogenic | -1.527 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
V/L | 0.6432 | likely_pathogenic | 0.6267 | pathogenic | -0.836 | Destabilizing | 0.997 | D | 0.759 | deleterious | D | 0.57146035 | None | None | N |
V/M | 0.7272 | likely_pathogenic | 0.7255 | pathogenic | -0.687 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
V/N | 0.9618 | likely_pathogenic | 0.9624 | pathogenic | -1.412 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
V/P | 0.9669 | likely_pathogenic | 0.9638 | pathogenic | -1.143 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
V/Q | 0.9438 | likely_pathogenic | 0.9452 | pathogenic | -1.505 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
V/R | 0.9208 | likely_pathogenic | 0.9172 | pathogenic | -1.077 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
V/S | 0.8929 | likely_pathogenic | 0.8938 | pathogenic | -1.999 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
V/T | 0.8084 | likely_pathogenic | 0.8274 | pathogenic | -1.821 | Destabilizing | 0.999 | D | 0.821 | deleterious | None | None | None | None | N |
V/W | 0.9941 | likely_pathogenic | 0.9938 | pathogenic | -1.513 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
V/Y | 0.9759 | likely_pathogenic | 0.9762 | pathogenic | -1.225 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.