Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34259 | 103000;103001;103002 | chr2:178533840;178533839;178533838 | chr2:179398567;179398566;179398565 |
N2AB | 32618 | 98077;98078;98079 | chr2:178533840;178533839;178533838 | chr2:179398567;179398566;179398565 |
N2A | 31691 | 95296;95297;95298 | chr2:178533840;178533839;178533838 | chr2:179398567;179398566;179398565 |
N2B | 25194 | 75805;75806;75807 | chr2:178533840;178533839;178533838 | chr2:179398567;179398566;179398565 |
Novex-1 | 25319 | 76180;76181;76182 | chr2:178533840;178533839;178533838 | chr2:179398567;179398566;179398565 |
Novex-2 | 25386 | 76381;76382;76383 | chr2:178533840;178533839;178533838 | chr2:179398567;179398566;179398565 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1301566986 | None | 0.977 | N | 0.503 | 0.367 | 0.366085729538 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs1301566986 | None | 0.977 | N | 0.503 | 0.367 | 0.366085729538 | gnomAD-4.0.0 | 1.23928E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69509E-06 | 0 | 0 |
E/Q | None | None | 0.997 | N | 0.627 | 0.285 | 0.463328977263 | gnomAD-4.0.0 | 6.84161E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99408E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4334 | ambiguous | 0.4551 | ambiguous | -0.558 | Destabilizing | 0.977 | D | 0.577 | neutral | N | 0.511990839 | None | None | N |
E/C | 0.964 | likely_pathogenic | 0.9676 | pathogenic | -0.316 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
E/D | 0.5256 | ambiguous | 0.5823 | pathogenic | -0.637 | Destabilizing | 0.898 | D | 0.452 | neutral | N | 0.509451966 | None | None | N |
E/F | 0.9537 | likely_pathogenic | 0.9695 | pathogenic | -0.064 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
E/G | 0.6821 | likely_pathogenic | 0.6952 | pathogenic | -0.846 | Destabilizing | 0.955 | D | 0.544 | neutral | N | 0.488645752 | None | None | N |
E/H | 0.8714 | likely_pathogenic | 0.8903 | pathogenic | 0.045 | Stabilizing | 0.998 | D | 0.647 | neutral | None | None | None | None | N |
E/I | 0.7308 | likely_pathogenic | 0.7761 | pathogenic | 0.201 | Stabilizing | 0.998 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/K | 0.5638 | ambiguous | 0.5863 | pathogenic | -0.038 | Destabilizing | 0.977 | D | 0.503 | neutral | N | 0.459964508 | None | None | N |
E/L | 0.823 | likely_pathogenic | 0.8618 | pathogenic | 0.201 | Stabilizing | 0.998 | D | 0.685 | prob.neutral | None | None | None | None | N |
E/M | 0.799 | likely_pathogenic | 0.8577 | pathogenic | 0.309 | Stabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
E/N | 0.7772 | likely_pathogenic | 0.8148 | pathogenic | -0.555 | Destabilizing | 0.289 | N | 0.266 | neutral | None | None | None | None | N |
E/P | 0.9897 | likely_pathogenic | 0.9674 | pathogenic | -0.03 | Destabilizing | 0.999 | D | 0.676 | prob.neutral | None | None | None | None | N |
E/Q | 0.3508 | ambiguous | 0.3881 | ambiguous | -0.449 | Destabilizing | 0.997 | D | 0.627 | neutral | N | 0.49080749 | None | None | N |
E/R | 0.6507 | likely_pathogenic | 0.668 | pathogenic | 0.307 | Stabilizing | 0.995 | D | 0.648 | neutral | None | None | None | None | N |
E/S | 0.5761 | likely_pathogenic | 0.6176 | pathogenic | -0.749 | Destabilizing | 0.966 | D | 0.524 | neutral | None | None | None | None | N |
E/T | 0.6063 | likely_pathogenic | 0.6499 | pathogenic | -0.506 | Destabilizing | 0.995 | D | 0.658 | neutral | None | None | None | None | N |
E/V | 0.5059 | ambiguous | 0.5738 | pathogenic | -0.03 | Destabilizing | 0.997 | D | 0.661 | neutral | N | 0.491556851 | None | None | N |
E/W | 0.989 | likely_pathogenic | 0.991 | pathogenic | 0.194 | Stabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
E/Y | 0.9281 | likely_pathogenic | 0.9412 | pathogenic | 0.2 | Stabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.